myRT

myRT report for GCA_001875165.1_ASM187516v1

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Seq: MPBV01000001.1 Pseudomonas aeruginosa strain AR_0054 scaffold00001, whole genome shotgun sequence (2863301 bp)
Overview 1 RT 1: 11167-18219 bp Neighborhood of RT #1 [11167, 18245] COG0610 DUF45 RVT-UG28 HTH_Tnp_1 PHA02517 Feature: gene Location: 11167-14448 bp Ori: OKN76258.1 Feature: domain Description: COG0610 Location: 11194-14281 bp Feature: domain Description: COG061 0 Location: 1 1 1 94-1 4281 bp Feature: gene Location: 14462-15172 bp Ori: OKN76259.1 Feature: domain Description: DUF45 Location: 14528-15149 bp Feature: domain Description: DUF45 Location: 1 4528-1 51 49 bp Feature: gene Location: 15439-16935 bp Ori: OKN76260.1 Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 15718-16354 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 1 571 8-1 6354 bp Feature: gene Location: 17085-17219 bp Ori: OKN76261.1 Feature: domain Description: HTH_Tnp_1 Location: 17094-17196 bp Feature: domain Description: HTH_Tnp_1 Location: 1 7094-1 71 96 bp Feature: gene Location: 17424-18245 bp Ori: OKN76262.1 Feature: domain Description: PHA02517 Location: 17442-18219 bp Feature: domain Description: PHA0251 7 Location: 1 7442-1 821 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), DUF45 (pfam01863), RVT-UG28, HTH_Tnp_1 (pfam01527), PHA02517 (putative transposase OrfB; Reviewed)