myRT

myRT report for GCA_001875585.1_BATSymA

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Seq: MIQH01000744.1 Bathymodiolus thermophilus thioautotrophic gill symbiont strain BAT/CrabSpa'14 BATSymA_Scaffold512, whole genome shotgun sequence (902 bp)
Overview 1 RT 1: 1-603 bp Neighborhood of RT #1 [1, 770] RVT-UNC RVT-Retrons Feature: gene Location: 1-219 bp Ori: OJA03342.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 4-112 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 4-1 1 2 bp Feature: gene Location: 252-770 bp Ori: OIR24273.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 315-603 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 5-603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons/RVT-AbiA/RVT-G2L4/RVT-UG11(RVT-UNC), RVT-Retrons

Seq: MIQH01000189.1 Bathymodiolus thermophilus thioautotrophic gill symbiont strain BAT/CrabSpa'14 BATSymA_Scaffold1168, whole genome shotgun sequence (249 bp)
Overview 1 RT 1: 1-100 bp Neighborhood of RT #1 [1, 207] RVT-UNC Feature: gene Location: 1-207 bp Ori: OJA03757.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 4-100 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 4-100 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons/RVT-AbiA/RVT-G2L4/RVT-UG11(RVT-UNC)

Seq: MIQH01000224.1 Bathymodiolus thermophilus thioautotrophic gill symbiont strain BAT/CrabSpa'14 BATSymA_Scaffold12, whole genome shotgun sequence (28141 bp)
Overview 1 RT 1: 8669-13369 bp Neighborhood of RT #1 [8669, 13380] COG2847 PhoH RVT-Retrons mnmA PRK00218 Feature: gene Location: 8669-9175 bp Ori: OIR25554.1 Feature: domain Description: COG2847 Location: 8741-9167 bp Feature: domain Description: COG2847 Location: 8741-9167 bp Feature: gene Location: 9429-10346 bp Ori: OIR25555.1 Feature: domain Description: PhoH Location: 9438-10338 bp Feature: domain Description: PhoH Location: 943 8-103 3 8 bp Feature: gene Location: 10604-10986 bp Ori: OJA03730.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10772-10982 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10772-10982 bp Feature: gene Location: 11693-12760 bp Ori: OIR25556.1 Feature: domain Description: mnmA Location: 11696-12749 bp Feature: domain Description: mnmA Location: 11696-12749 bp Feature: gene Location: 12775-13380 bp Ori: OIR25557.1 Feature: domain Description: PRK00218 Location: 12778-13369 bp Feature: domain Description: PRK00218 Location: 12778-13 3 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2847 (Copper(I)-binding protein ), PhoH (pfam02562), RVT-Retrons, mnmA (PRK14665), PRK00218 (lysogenization regulator HflD)

Seq: MIQH01000444.1 Bathymodiolus thermophilus thioautotrophic gill symbiont strain BAT/CrabSpa'14 BATSymA_Scaffold241, whole genome shotgun sequence (2364 bp)
Overview 1 RT 1: 675-1488 bp Neighborhood of RT #1 [675, 1886] RVT-UG17 Feature: gene Location: 675-1886 bp Ori: OIR24986.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 888-1488 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 888-14 88 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17

Seq: MIQH01000190.1 Bathymodiolus thermophilus thioautotrophic gill symbiont strain BAT/CrabSpa'14 BATSymA_Scaffold1169, whole genome shotgun sequence (248 bp)
Overview 1 RT 1: 1-241 bp Neighborhood of RT #1 [1, 248] RVT-Retrons Feature: gene Location: 1-248 bp Ori: OJA03756.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4-241 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4-241 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: MIQH01001227.1 Bathymodiolus thermophilus thioautotrophic gill symbiont strain BAT/CrabSpa'14 BATSymA_Scaffold95, whole genome shotgun sequence (9334 bp)
Overview 1 RT 1: 1-3979 bp Neighborhood of RT #1 [1, 3979] RVT-CRISPR Cas_Cas1 Csx3_III-U Feature: gene Location: 1-2219 bp Ori: OIR23692.2 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 949-1537 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 949-1537 bp Feature: domain Description: Cas_Cas1 Location: 1747-2215 bp Feature: domain Description: Cas_Cas1 Location: 1747-2215 bp Feature: gene Location: 2356-2553 bp Ori: OIR23698.1 Feature: domain Description: Csx3_III-U Location: 2416-2545 bp Feature: domain Description: Csx3_III-U Location: 2416 -2545 bp Feature: gene Location: 3324-3979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas_Cas1 (pfam01867), Csx3_III-U (cl09837)