myRT

myRT report for GCA_001879765.1_ASM187976v1

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Seq: MEJL01000037.1 Salmonella enterica subsp. enterica serovar Oranienburg strain CFSAN039518 scaffold_6, whole genome shotgun sequence (235881 bp)
Overview 1 RT 1: 232090-235030 bp Neighborhood of RT #1 [232090, 235641] HTH_36 RVT-AbiP2 Feature: gene Location: 232090-232515 bp Feature: gene Location: 233425-233934 bp Ori: OIW37845.1 Feature: domain Description: HTH_36 Location: 233611-233755 bp Feature: domain Description: HTH_36 Location: 23361 1 -233755 bp Feature: gene Location: 234142-235641 bp Ori: OIW37846.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 234574-235030 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 234574-235030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), RVT-AbiP2

Seq: MEJL01000006.1 Salmonella enterica subsp. enterica serovar Oranienburg strain CFSAN039518 scaffold_13, whole genome shotgun sequence (82927 bp)
Overview 1 RT 1: 31768-38143 bp Neighborhood of RT #1 [31768, 38148] PRK09692 RVT-Retrons PRK10473 PRK10216 Feature: gene Location: 31768-32910 bp Ori: OIW42744.1 Feature: domain Description: PRK09692 Location: 31789-32848 bp Feature: domain Description: PRK09692 Location: 31789-32 848 bp Feature: gene Location: 33235-34197 bp Feature: gene Location: 34197-35132 bp Ori: OIW42746.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34308-34893 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34308-34893 bp Feature: gene Location: 36033-37220 bp Ori: OIW42747.1 Feature: domain Description: PRK10473 Location: 36036-37212 bp Feature: domain Description: PRK10473 Location: 36036-372 12 bp Feature: gene Location: 37189-38148 bp Ori: OIW42748.1 Feature: domain Description: PRK10216 Location: 37192-38143 bp Feature: domain Description: PRK102 16 Location: 37192 -38143 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter), PRK10216 (HTH-type transcriptional regulator YidZ)