myRT

myRT report for GCA_001879855.1_ASM187985v1

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Seq: MEJN01000008.1 Salmonella enterica subsp. enterica serovar Oranienburg strain CFSAN039521 scaffold_15, whole genome shotgun sequence (82920 bp)
Overview 1 RT 1: 31761-38136 bp Neighborhood of RT #1 [31761, 38141] PRK09692 RVT-Retrons PRK10473 PRK10216 Feature: gene Location: 31761-32903 bp Ori: OIW53834.1 Feature: domain Description: PRK09692 Location: 31782-32841 bp Feature: domain Description: PRK09692 Location: 31 782-32841 bp Feature: gene Location: 33228-34190 bp Feature: gene Location: 34190-35125 bp Ori: OIW53836.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34301-34886 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34301 -34886 bp Feature: gene Location: 36026-37213 bp Ori: OIW53837.1 Feature: domain Description: PRK10473 Location: 36029-37205 bp Feature: domain Description: PRK1 0473 Location: 36029-37205 bp Feature: gene Location: 37182-38141 bp Ori: OIW53838.1 Feature: domain Description: PRK10216 Location: 37185-38136 bp Feature: domain Description: PRK1 021 6 Location: 371 85-381 36 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter), PRK10216 (HTH-type transcriptional regulator YidZ)

Seq: MEJN01000039.1 Salmonella enterica subsp. enterica serovar Oranienburg strain CFSAN039521 scaffold_6, whole genome shotgun sequence (244832 bp)
Overview 1 RT 1: 240942-244185 bp Neighborhood of RT #1 [240942, 244796] DUF4062 RVT-AbiP2 Feature: gene Location: 240942-241523 bp Feature: gene Location: 241573-242898 bp Ori: OIW50209.1 Feature: domain Description: DUF4062 Location: 241594-241837 bp Feature: domain Description: DUF4062 Location: 2 41594-2 41837 bp Feature: gene Location: 243297-244796 bp Ori: OIW50200.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 243729-244185 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 4372 9-2 44185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4062 (pfam13271), RVT-AbiP2