myRT

myRT report for GCA_001880015.1_ASM188001v1

Download annotations/find similar RTs

Seq: MEJS01000014.1 Salmonella enterica subsp. enterica serovar Oranienburg strain CFSAN039528 scaffold_20, whole genome shotgun sequence (82940 bp)
Overview 1 RT 1: 31781-38156 bp Neighborhood of RT #1 [31781, 38161] PRK09692 RVT-Retrons PRK10473 PRK10216 Feature: gene Location: 31781-32923 bp Ori: OIW81101.1 Feature: domain Description: PRK09692 Location: 31802-32861 bp Feature: domain Description: PRK09692 Location: 31 802-32861 bp Feature: gene Location: 33248-34210 bp Feature: gene Location: 34210-35145 bp Ori: OIW81103.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34321-34906 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34321 -34906 bp Feature: gene Location: 36046-37233 bp Ori: OIW81104.1 Feature: domain Description: PRK10473 Location: 36049-37225 bp Feature: domain Description: PRK1 0473 Location: 36049-37225 bp Feature: gene Location: 37202-38161 bp Ori: OIW81105.1 Feature: domain Description: PRK10216 Location: 37205-38156 bp Feature: domain Description: PRK1 021 6 Location: 37205-381 56 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter), PRK10216 (HTH-type transcriptional regulator YidZ)

Seq: MEJS01000041.1 Salmonella enterica subsp. enterica serovar Oranienburg strain CFSAN039528 scaffold_45, whole genome shotgun sequence (1653 bp)
Overview 1 RT 1: 97-985 bp Neighborhood of RT #1 [97, 1596] RVT-AbiP2 Feature: gene Location: 97-1596 bp Ori: OIW77390.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 529-985 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 52 9-985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2