myRT

myRT report for GCA_001880025.1_ASM188002v1

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Seq: MEJT01000014.1 Salmonella enterica subsp. enterica serovar Oranienburg strain CFSAN039529 scaffold_20, whole genome shotgun sequence (82938 bp)
Overview 1 RT 1: 31779-38154 bp Neighborhood of RT #1 [31779, 38159] PRK09692 RVT-Retrons PRK10473 PRK10216 Feature: gene Location: 31779-32921 bp Ori: OIW79093.1 Feature: domain Description: PRK09692 Location: 31800-32859 bp Feature: domain Description: PRK09692 Location: 31 800-32859 bp Feature: gene Location: 33246-34208 bp Feature: gene Location: 34208-35143 bp Ori: OIW79095.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34319-34904 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3431 9-34904 bp Feature: gene Location: 36044-37231 bp Ori: OIW79096.1 Feature: domain Description: PRK10473 Location: 36047-37223 bp Feature: domain Description: PRK1 0473 Location: 36047-37223 bp Feature: gene Location: 37200-38159 bp Ori: OIW79097.1 Feature: domain Description: PRK10216 Location: 37203-38154 bp Feature: domain Description: PRK1 021 6 Location: 37203-381 54 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter), PRK10216 (HTH-type transcriptional regulator YidZ)

Seq: MEJT01000005.1 Salmonella enterica subsp. enterica serovar Oranienburg strain CFSAN039529 scaffold_12, whole genome shotgun sequence (138744 bp)
Overview 1 RT 1: 134842-138085 bp Neighborhood of RT #1 [134842, 138696] DUF4062 RVT-AbiP2 Feature: gene Location: 134842-135423 bp Feature: gene Location: 135473-136798 bp Ori: OIW81512.1 Feature: domain Description: DUF4062 Location: 135494-135737 bp Feature: domain Description: DUF4062 Location: 135494-135737 bp Feature: gene Location: 137197-138696 bp Ori: OIW81509.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 137629-138085 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 13762 9-138085 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4062 (pfam13271), RVT-AbiP2