myRT

myRT report for GCA_001880105.1_ASM188010v1

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Seq: MEJX01000029.1 Salmonella enterica subsp. enterica serovar Oranienburg strain CFSAN039536 scaffold_4, whole genome shotgun sequence (245058 bp)
Overview 1 RT 1: 241039-244282 bp Neighborhood of RT #1 [241039, 244893] DUF4062 RVT-AbiP2 Feature: gene Location: 241039-241620 bp Feature: gene Location: 241670-242995 bp Ori: OIW91617.1 Feature: domain Description: DUF4062 Location: 241691-241934 bp Feature: domain Description: DUF4062 Location: 241 691 -241 934 bp Feature: gene Location: 243394-244893 bp Ori: OIW91608.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 243826-244282 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 243826-244282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4062 (pfam13271), RVT-AbiP2

Seq: MEJX01000005.1 Salmonella enterica subsp. enterica serovar Oranienburg strain CFSAN039536 scaffold_12, whole genome shotgun sequence (83023 bp)
Overview 1 RT 1: 31792-38167 bp Neighborhood of RT #1 [31792, 38172] PRK09692 RVT-Retrons PRK10473 PRK10216 Feature: gene Location: 31792-32934 bp Ori: OIW94668.1 Feature: domain Description: PRK09692 Location: 31813-32872 bp Feature: domain Description: PRK09692 Location: 31813-32 872 bp Feature: gene Location: 33259-34221 bp Feature: gene Location: 34221-35156 bp Ori: OIW94670.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34332-34917 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34332 -34917 bp Feature: gene Location: 36057-37244 bp Ori: OIW94671.1 Feature: domain Description: PRK10473 Location: 36060-37236 bp Feature: domain Description: PRK10473 Location: 36060-372 36 bp Feature: gene Location: 37213-38172 bp Ori: OIW94672.1 Feature: domain Description: PRK10216 Location: 37216-38167 bp Feature: domain Description: PRK102 16 Location: 372 16-38167 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter), PRK10216 (HTH-type transcriptional regulator YidZ)