myRT

myRT report for GCA_001880125.1_ASM188012v1

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Seq: MOXR01000193.1 Bacillus thuringiensis serovar kurstaki strain BP865 scaffold193.1, whole genome shotgun sequence (688 bp)
Overview 1 RT 1: 104-647 bp Neighborhood of RT #1 [104, 688] RVT-GII Feature: gene Location: 104-688 bp Ori: OIX15191.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185-647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 85-647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MOXR01000004.1 Bacillus thuringiensis serovar kurstaki strain BP865 scaffold4.1, whole genome shotgun sequence (192170 bp)
Overview 1 RT 1: 100-4043 bp Neighborhood of RT #1 [100, 4051] RVT-GII HNHc SMC_prok_B rnc Feature: gene Location: 100-1905 bp Ori: OIX30002.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1090 bp Feature: domain Description: HNHc Note: nucleases Location: 1651-1789 bp Feature: domain Description: HNHc Note: nucleases Location: 1651-1789 bp Feature: gene Location: 2676-3167 bp Ori: OIX30003.1 Feature: domain Description: SMC_prok_B Location: 2682-3150 bp Feature: domain Description: SMC_prok_B Location: 2 682 -3150 bp Feature: gene Location: 3314-4051 bp Ori: OIX30004.1 Feature: domain Description: rnc Location: 3365-4043 bp Feature: domain Description: rnc Location: 3365-4043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), SMC_prok_B (TIGR02168), rnc (PRK00102)

Seq: MOXR01000019.1 Bacillus thuringiensis serovar kurstaki strain BP865 scaffold19.1, whole genome shotgun sequence (106944 bp)
Overview 1 RT 1: 102315-106480 bp Neighborhood of RT #1 [102315, 106480] NupC NupC RVT-GII HNHc Feature: gene Location: 102315-103496 bp Ori: OIX28056.1 Feature: domain Description: NupC Location: 102318-103494 bp Feature: domain Description: NupC Location: 1023 18-103 494 bp Feature: gene Location: 103887-104132 bp Ori: OIX28057.1 Feature: domain Description: NupC Location: 103893-103983 bp Feature: domain Description: NupC Location: 103 893 -103 983 bp Feature: gene Location: 104398-106194 bp Ori: OIX28058.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104692-105388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104692-1053 88 bp Feature: domain Description: HNHc Note: nucleases Location: 105988-106063 bp Feature: domain Description: HNHc Note: nucleases Location: 105988-106063 bp Feature: gene Location: 106226-106480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NupC (COG1972), RVT-GII, HNHc (smart00507)

Seq: MOXR01000192.1 Bacillus thuringiensis serovar kurstaki strain BP865 scaffold192.1, whole genome shotgun sequence (726 bp)
Overview 1 RT 1: 1-274 bp Neighborhood of RT #1 [1, 726] RVT-GII Feature: gene Location: 1-726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 -274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MOXR01000099.1 Bacillus thuringiensis serovar kurstaki strain BP865 scaffold99.1, whole genome shotgun sequence (14010 bp)
Overview 1 RT 1: 4845-14010 bp Neighborhood of RT #1 [4845, 14010] RapH_N TPR TPR PRK13922 AE_Prim_S_like RVT-UG10 Feature: gene Location: 4845-5936 bp Ori: OIX19746.1 Feature: domain Description: RapH_N Location: 4866-5037 bp Feature: domain Description: RapH_N Location: 4866-5 037 bp Feature: domain Description: TPR Location: 5172-5439 bp Feature: domain Description: TPR Location: 5 172-5 439 bp Feature: domain Description: TPR Location: 5484-5895 bp Feature: domain Description: TPR Location: 5 484-5 895 bp Feature: gene Location: 6411-6623 bp Ori: OIX19747.1 Feature: domain Description: PRK13922 Location: 6483-6603 bp Feature: domain Description: PRK13922 Location: 6483-6603 bp Feature: gene Location: 6899-12538 bp Ori: OIX19748.1 Feature: domain Description: AE_Prim_S_like Location: 7109-7328 bp Feature: domain Description: AE_Prim_S_like Location: 7109-7328 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 8315-8969 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 8315 -8969 bp Feature: gene Location: 12977-13402 bp Feature: gene Location: 13412-14010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RapH_N (pfam18801), TPR (smart00028), PRK13922 (rod shape-determining protein MreC; Provisional), AE_Prim_S_like (cl01287), RVT-UG10

Seq: MOXR01000030.1 Bacillus thuringiensis serovar kurstaki strain BP865 scaffold30.1, whole genome shotgun sequence (66676 bp)
Overview 1 RT 1: 35123-42352 bp Neighborhood of RT #1 [35123, 42352] RVT-GII GIIM KOG1000 KOG1000 Feature: gene Location: 35123-35350 bp Feature: gene Location: 35422-36315 bp Feature: gene Location: 37077-38942 bp Ori: OIX27023.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37377-38082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37377-38082 bp Feature: domain Description: GIIM Note: maturase Location: 38169-38352 bp Feature: domain Description: GIIM Note: maturase Location: 3816 9-38352 bp Feature: gene Location: 39211-41622 bp Feature: domain Description: KOG1000 Location: 39928-40144 bp Feature: domain Description: KOG1000 Location: 39928-40144 bp Feature: domain Description: KOG1000 Location: 40747-41080 bp Feature: domain Description: KOG1000 Location: 40747-41080 bp Feature: gene Location: 41639-42352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: MOXR01000069.1 Bacillus thuringiensis serovar kurstaki strain BP865 scaffold69.1, whole genome shotgun sequence (24747 bp)
Overview 1 RT 1: 21545-24203 bp Neighborhood of RT #1 [21545, 24280] RVT-GII GIIM Feature: gene Location: 21545-21931 bp Feature: gene Location: 22238-22495 bp Feature: gene Location: 22979-24280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23264-23903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23264-23903 bp Feature: domain Description: GIIM Note: maturase Location: 23978-24203 bp Feature: domain Description: GIIM Note: maturase Location: 2397 8-24203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MOXR01000155.1 Bacillus thuringiensis serovar kurstaki strain BP865 scaffold155.1, whole genome shotgun sequence (3044 bp)
Overview 1 RT 1: 115-2814 bp Neighborhood of RT #1 [115, 2951] CwlT_like RVT-GII HNHc Feature: gene Location: 115-282 bp Ori: OIX16876.1 Feature: domain Description: CwlT_like Location: 157-265 bp Feature: domain Description: CwlT_like Location: 157-265 bp Feature: gene Location: 1155-2951 bp Ori: OIX16877.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1413-2118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1413-2118 bp Feature: domain Description: HNHc Note: nucleases Location: 2679-2814 bp Feature: domain Description: HNHc Note: nucleases Location: 2679-28 14 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, RVT-GII, HNHc (smart00507)

Seq: MOXR01000217.1 Bacillus thuringiensis serovar kurstaki strain BP865 scaffold217.1, whole genome shotgun sequence (318 bp)
Overview 1 RT 1: 1-157 bp Neighborhood of RT #1 [1, 318] RVT-GII Feature: gene Location: 1-318 bp Ori: OIX14630.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MOXR01000052.1 Bacillus thuringiensis serovar kurstaki strain BP865 scaffold52.1, whole genome shotgun sequence (34684 bp)
Overview 1 RT 1: 27648-34453 bp Neighborhood of RT #1 [27648, 34578] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc Feature: gene Location: 27648-28034 bp Feature: gene Location: 28052-29197 bp Feature: gene Location: 29798-31621 bp Ori: OIX25620.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30068-30896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30068-30896 bp Feature: domain Description: Intron_maturas2 Location: 30968-31286 bp Feature: domain Description: Intron_maturas2 Location: 30968-31286 bp Feature: domain Description: HNHc Note: nucleases Location: 31439-31592 bp Feature: domain Description: HNHc Note: nucleases Location: 31439-31592 bp Feature: gene Location: 32788-34578 bp Ori: OIX25621.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33085-33781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33085-33781 bp Feature: domain Description: HNHc Note: nucleases Location: 34321-34453 bp Feature: domain Description: HNHc Note: nucleases Location: 34321-34453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)