myRT

myRT report for GCA_001880665.1_ASM188066v1

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Seq: MCQK01000003.1 Streptococcus agalactiae serogroup III strain CH-2 CH-2_contig000003, whole genome shotgun sequence (202830 bp)
Overview 1 RT 1: 125388-135557 bp Neighborhood of RT #1 [125388, 135557] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 125388-125687 bp Feature: gene Location: 125758-127245 bp Feature: domain Description: KOG1000 Location: 126181-126493 bp Feature: domain Description: KOG1 000 Location: 1 261 81 -1 26493 bp Feature: gene Location: 127239-129017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127500-128292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 27500-1 28292 bp Feature: domain Description: Intron_maturas2 Location: 128397-128628 bp Feature: domain Description: Intron_maturas2 Location: 1 28397-1 28628 bp Feature: domain Description: HNHc Note: nucleases Location: 128793-128979 bp Feature: domain Description: HNHc Note: nucleases Location: 1 28793-1 28979 bp Feature: gene Location: 129515-134956 bp Feature: domain Description: N6_Mtase Location: 131507-132098 bp Feature: domain Description: N6_Mtase Location: 1 31 507-1 32098 bp Feature: domain Description: COG4646 Location: 132692-134813 bp Feature: domain Description: COG4646 Location: 1 32692-1 3481 3 bp Feature: gene Location: 135006-135557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: MCQK01000032.1 Streptococcus agalactiae serogroup III strain CH-2 CH-2_contig000032, whole genome shotgun sequence (1862 bp)
Overview 1 RT 1: 67-1302 bp Neighborhood of RT #1 [67, 1376] RVT-GII Feature: gene Location: 67-336 bp Feature: gene Location: 450-1376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 687-1302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 687-1302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII