myRT

myRT report for GCA_001880795.1_ASM188079v1

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Seq: MCON01000147.1 Citrobacter freundii strain CF6_ST18 NODE_50_length_6826_cov_28.3297_ID_1993, whole genome shotgun sequence (6826 bp)
Overview 1 RT 1: 4127-6825 bp Neighborhood of RT #1 [4127, 6826] PRK10276 RVT-GII InsA Feature: gene Location: 4127-4558 bp Ori: OIY03485.1 Feature: domain Description: PRK10276 Location: 4178-4541 bp Feature: domain Description: PRK1 0276 Location: 41 78-4541 bp Feature: gene Location: 5135-5329 bp Feature: gene Location: 5441-6451 bp Ori: OIY03486.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5447-6059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5447-6059 bp Feature: gene Location: 6603-6826 bp Ori: OIY03488.1 Feature: domain Description: InsA Location: 6609-6825 bp Feature: domain Description: InsA Location: 6609-6825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677)

Seq: MCON01000150.1 Citrobacter freundii strain CF6_ST18 NODE_53_length_6237_cov_20.107_ID_1999, whole genome shotgun sequence (6237 bp)
Overview 1 RT 1: 148-5474 bp Neighborhood of RT #1 [148, 5474] PinE PRK09692 RVT-UG7 Feature: gene Location: 148-693 bp Ori: OIY03397.1 Feature: domain Description: PinE Location: 151-682 bp Feature: domain Description: PinE Location: 151-682 bp Feature: gene Location: 1088-2272 bp Ori: OIY03398.1 Feature: domain Description: PRK09692 Location: 1094-2249 bp Feature: domain Description: PRK09692 Location: 1094-2 2 49 bp Feature: gene Location: 2265-3914 bp Ori: OIY03399.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2673-3102 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2 673-3102 bp Feature: gene Location: 3911-4651 bp Feature: gene Location: 5181-5474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), PRK09692 (Integrase; provisional), RVT-UG7