myRT

myRT report for GCA_001881505.1_ASM188150v1

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Seq: MPAY01000034.1 Escherichia coli strain KG-8 NODE_26_length_71019_cov_8.32806_ID_51, whole genome shotgun sequence (71019 bp)
Overview 1 RT 1: 24664-31480 bp Neighborhood of RT #1 [24664, 31491] PRK15011 COG3943 RVT-Retrons Prim_Zn_Ribbon COG3378 Feature: gene Location: 24664-25848 bp Feature: domain Description: PRK15011 Location: 24673-25846 bp Feature: domain Description: PRK1 501 1 Location: 24673-25846 bp Feature: gene Location: 26230-26376 bp Feature: domain Description: COG3943 Location: 26233-26332 bp Feature: domain Description: COG3943 Location: 26233-26332 bp Feature: gene Location: 26669-27619 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26768-27359 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26768-27359 bp Feature: gene Location: 27606-28556 bp Feature: gene Location: 29158-31491 bp Feature: domain Description: Prim_Zn_Ribbon Location: 29248-29356 bp Feature: domain Description: Prim_Zn_Ribbon Location: 29248-29356 bp Feature: domain Description: COG3378 Location: 29968-31480 bp Feature: domain Description: COG3378 Location: 29968-31 480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15011 (sugar efflux transporter SetB), COG3943 (Uncharacterized conserved protein ), RVT-Retrons, Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase )

Seq: MPAY01000067.1 Escherichia coli strain KG-8 NODE_77_length_3206_cov_7.29523_ID_153, whole genome shotgun sequence (3206 bp)
Overview 1 RT 1: 662-3078 bp Neighborhood of RT #1 [662, 3086] RVT_N RVT-GII GIIM HNHc ArdA Feature: gene Location: 662-2329 bp Feature: RT Description: RVT_N Location: 710-947 bp Feature: RT Description: RVT_N Location: 710-947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1640 bp Feature: domain Description: GIIM Note: maturase Location: 1691-1925 bp Feature: domain Description: GIIM Note: maturase Location: 1691-192 5 bp Feature: domain Description: HNHc Note: nucleases Location: 2135-2294 bp Feature: domain Description: HNHc Note: nucleases Location: 2 135-2 2 94 bp Feature: gene Location: 2586-3086 bp Feature: domain Description: ArdA Location: 2601-3078 bp Feature: domain Description: ArdA Location: 2 601-3078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)