myRT

myRT report for GCA_001882395.1_ASM188239v1

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Seq: MEAU01000003.1 Burkholderia ubonensis strain MSMB0103 Contig_11, whole genome shotgun sequence (150867 bp)
Overview 1 RT 1: 1-4417 bp Neighborhood of RT #1 [1, 4434] RVT-G2L COG3450 MR_like_1 Feature: gene Location: 1-248 bp Feature: gene Location: 474-1670 bp Ori: OJA50431.1 Feature: RT Description: RVT-G2L Note: G2L RT Location: 696-1350 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 696-1 350 bp Feature: gene Location: 2268-2612 bp Ori: OJA50432.1 Feature: domain Description: COG3450 Location: 2271-2607 bp Feature: domain Description: COG3450 Location: 2271 -2607 bp Feature: gene Location: 3265-4434 bp Ori: OJA50433.1 Feature: domain Description: MR_like_1 Location: 3271-4417 bp Feature: domain Description: MR_like_1 Location: 3271 -441 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L, COG3450 (Predicted enzyme of the cupin superfamily ), MR_like_1 (cd03326)

Seq: MEAU01000021.1 Burkholderia ubonensis strain MSMB0103 Contig_28, whole genome shotgun sequence (143472 bp)
Overview 1 RT 1: 803-7531 bp Neighborhood of RT #1 [803, 7542] PRK07533 DUF3141 RVT-Retrons VOC AraC Feature: gene Location: 803-1582 bp Ori: OJA46692.1 Feature: domain Description: PRK07533 Location: 821-1577 bp Feature: domain Description: PRK07533 Location: 82 1-1577 bp Feature: gene Location: 1771-4029 bp Ori: OJA46693.1 Feature: domain Description: DUF3141 Location: 1897-3628 bp Feature: domain Description: DUF3141 Location: 1897-362 8 bp Feature: gene Location: 4238-5587 bp Ori: OJA46694.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4703-5339 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4703-5339 bp Feature: gene Location: 5890-6276 bp Ori: OJA46695.1 Feature: domain Description: VOC Location: 5905-6226 bp Feature: domain Description: VOC Location: 5905-62 2 6 bp Feature: gene Location: 6715-7542 bp Ori: OJA46696.1 Feature: domain Description: AraC Location: 7177-7531 bp Feature: domain Description: AraC Location: 7177-7531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07533 (enoyl- reductase FabI), DUF3141 (pfam11339), RVT-Retrons, VOC (cl14632), AraC (COG2207)

Seq: MEAU01000041.1 Burkholderia ubonensis strain MSMB0103 Contig_46, whole genome shotgun sequence (40476 bp)
Overview 1 RT 1: 22627-28337 bp Neighborhood of RT #1 [22627, 33094] SLATT_5 RVT-UG17 ComEC ComEC Trypsin_2 pfam13191 Feature: gene Location: 22627-23340 bp Feature: gene Location: 23631-24263 bp Ori: OJA43198.1 Feature: domain Description: SLATT_5 Location: 23676-24243 bp Feature: domain Description: SLATT_5 Location: 23 676-24243 bp Feature: gene Location: 24260-25660 bp Ori: OJA43199.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 24497-25094 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 24497-25094 bp Feature: gene Location: 26100-27272 bp Ori: OJA43200.1 Feature: domain Description: ComEC Location: 26136-26322 bp Feature: domain Description: ComEC Location: 2613 6-263 22 bp Feature: domain Description: ComEC Location: 26862-27135 bp Feature: domain Description: ComEC Location: 26862-2713 5 bp Feature: gene Location: 27284-33094 bp Ori: OJA43201.1 Feature: domain Description: Trypsin_2 Location: 27344-27758 bp Feature: domain Description: Trypsin_2 Location: 273 44-27758 bp Feature: domain Description: pfam13191 Location: 27920-28337 bp Feature: domain Description: pfam13 191 Location: 27920-283 3 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, ComEC (COG2333), Trypsin_2 (pfam13365), pfam13191 (AAA_16;AAA ATPase domain)