myRT

myRT report for GCA_001882475.1_ASM188247v1

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Seq: MEBE01000023.1 Burkholderia ubonensis strain MSMB0245 Contig_3, whole genome shotgun sequence (510374 bp)
Overview 1 RT 1: 193239-200115 bp Neighborhood of RT #1 [193239, 200120] Cupin_6 AraC VOC RVT-Retrons DUF3141 PRK07533 Feature: gene Location: 193239-194066 bp Ori: OJA99121.1 Feature: domain Description: Cupin_6 Location: 193248-193707 bp Feature: domain Description: Cupin_6 Location: 1 93248-1 93707 bp Feature: domain Description: AraC Location: 193716-194055 bp Feature: domain Description: AraC Location: 1 9371 6-1 94055 bp Feature: gene Location: 194505-194891 bp Ori: OJA99122.1 Feature: domain Description: VOC Location: 194520-194841 bp Feature: domain Description: VOC Location: 1 94520-1 94841 bp Feature: gene Location: 195194-196543 bp Ori: OJA99123.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 195659-196295 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 95659-1 96295 bp Feature: gene Location: 196792-199050 bp Ori: OJA99124.1 Feature: domain Description: DUF3141 Location: 196918-198649 bp Feature: domain Description: DUF31 41 Location: 1 9691 8-1 98649 bp Feature: gene Location: 199341-200120 bp Ori: OJA99125.1 Feature: domain Description: PRK07533 Location: 199359-200115 bp Feature: domain Description: PRK07533 Location: 1 99359-2001 1 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cupin_6 (pfam12852), AraC (COG2207), VOC (cl14632), RVT-Retrons, DUF3141 (pfam11339), PRK07533 (enoyl- reductase FabI)

Seq: MEBE01000012.1 Burkholderia ubonensis strain MSMB0245 Contig_2, whole genome shotgun sequence (316214 bp)
Overview 1 RT 1: 55577-58009 bp Neighborhood of RT #1 [55577, 58065] RVT-UG8 PinE Feature: gene Location: 55577-57013 bp Ori: OJB01040.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 55583-56018 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 55583-56018 bp Feature: gene Location: 57445-58065 bp Ori: OJB00816.1 Feature: domain Description: PinE Location: 57454-58009 bp Feature: domain Description: PinE Location: 57454-58009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, PinE (COG1961)

Seq: MEBE01000027.1 Burkholderia ubonensis strain MSMB0245 Contig_33, whole genome shotgun sequence (96681 bp)
Overview 1 RT 1: 94587-96283 bp Neighborhood of RT #1 [94587, 96663] CheX REC RVT-GII Feature: gene Location: 94587-95546 bp Ori: OJA98582.1 Feature: domain Description: CheX Location: 95103-95403 bp Feature: domain Description: CheX Location: 95103 -95403 bp Feature: gene Location: 95589-95954 bp Ori: OJA98583.1 Feature: domain Description: REC Location: 95604-95946 bp Feature: domain Description: REC Location: 95604-95946 bp Feature: gene Location: 95992-96663 bp Ori: OJA98584.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96028-96283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96028-96283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CheX (pfam13690), REC (smart00448), RVT-GII