myRT

myRT report for GCA_001882865.1_ASM188286v1

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Seq: MEBN01000159.1 Burkholderia ubonensis strain MSMB0686 Contig_88, whole genome shotgun sequence (47087 bp)
Overview 1 RT 1: 180-7050 bp Neighborhood of RT #1 [180, 7061] PRK07533 DUF3141 RVT-Retrons VOC Cupin_6 AraC Feature: gene Location: 180-959 bp Feature: domain Description: PRK07533 Location: 198-954 bp Feature: domain Description: PRK07533 Location: 1 98-954 bp Feature: gene Location: 1250-3508 bp Feature: domain Description: DUF3141 Location: 1376-3107 bp Feature: domain Description: DUF31 41 Location: 1 376-31 07 bp Feature: gene Location: 3757-5106 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4222-4858 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4222-4858 bp Feature: gene Location: 5409-5795 bp Feature: domain Description: VOC Location: 5424-5745 bp Feature: domain Description: VOC Location: 5424-5745 bp Feature: gene Location: 6234-7061 bp Feature: domain Description: Cupin_6 Location: 6243-6702 bp Feature: domain Description: Cupin_6 Location: 6243-6702 bp Feature: domain Description: AraC Location: 6711-7050 bp Feature: domain Description: AraC Location: 671 1 -7050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, VOC (cl14632), Cupin_6 (pfam12852), AraC (COG2207)

Seq: MEBN01000109.1 Burkholderia ubonensis strain MSMB0686 Contig_42, whole genome shotgun sequence (39343 bp)
Overview 1 RT 1: 32057-36313 bp Neighborhood of RT #1 [32057, 36387] INT_Rci_Hp1_C HTH_XRE RVT-Retrons Phage_int_SAM_1 INT_C_like_6 DUF2513 Feature: gene Location: 32057-33184 bp Feature: domain Description: INT_Rci_Hp1_C Location: 32624-33149 bp Feature: domain Description: INT_Rci_Hp1_C Location: 32 62 4-33149 bp Feature: gene Location: 33758-34069 bp Feature: domain Description: HTH_XRE Location: 33770-33941 bp Feature: domain Description: HTH_XRE Location: 33770-33941 bp Feature: gene Location: 34170-35045 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34248-34782 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 342 48-34782 bp Feature: gene Location: 35049-36011 bp Feature: domain Description: Phage_int_SAM_1 Location: 35166-35364 bp Feature: domain Description: Phage_int_SAM_1 Location: 35166-35364 bp Feature: domain Description: INT_C_like_6 Location: 35454-35994 bp Feature: domain Description: INT_C_like_6 Location: 35454-35994 bp Feature: gene Location: 36004-36387 bp Feature: domain Description: DUF2513 Location: 36010-36313 bp Feature: domain Description: DUF2 513 Location: 36010-36313 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Rci_Hp1_C (cd00796), HTH_XRE (smart00530), RVT-Retrons, Phage_int_SAM_1 (pfam02899), INT_C_like_6 (cd01196), DUF2513 (pfam10711)