myRT

myRT report for GCA_001883945.1_ASM188394v1

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Seq: LZRC01000133.1 Bacillus thuringiensis strain FN31 contig98, whole genome shotgun sequence (689 bp)
Overview 1 RT 1: 1-688 bp Neighborhood of RT #1 [1, 689] RVT-GII GIIM Feature: gene Location: 1-689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-424 bp Feature: domain Description: GIIM Note: maturase Location: 490-688 bp Feature: domain Description: GIIM Note: maturase Location: 490-688 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LZRC01000065.1 Bacillus thuringiensis strain FN31 contig36, whole genome shotgun sequence (1121 bp)
Overview 1 RT 1: 1-523 bp Neighborhood of RT #1 [1, 524] RVT_N RVT-GII Feature: gene Location: 1-524 bp Feature: domain Description: RVT_N Location: 49-289 bp Feature: domain Description: RVT_N Location: 49-2 89 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 349-523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 349-52 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: LZRC01000082.1 Bacillus thuringiensis strain FN31 contig51, whole genome shotgun sequence (73216 bp)
Overview 1 RT 1: 37024-41521 bp Neighborhood of RT #1 [37024, 41521] DUF4870 PRK10420 RVT-GII DEDD_Tnp_IS110 Feature: gene Location: 37024-37341 bp Ori: OJE20171.1 Feature: domain Description: DUF4870 Location: 37042-37318 bp Feature: domain Description: DUF4870 Location: 3 7042-3 73 18 bp Feature: gene Location: 37639-39300 bp Ori: OJE20172.1 Feature: domain Description: PRK10420 Location: 37642-39298 bp Feature: domain Description: PRK10420 Location: 3 7642-3 9298 bp Feature: gene Location: 39500-39730 bp Ori: OJE20201.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39548-39668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 9548-3 9668 bp Feature: gene Location: 39660-40807 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 39675-40149 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 3 9675-40149 bp Feature: gene Location: 41219-41521 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4870 (pfam09685), PRK10420 (L-lactate permease; Provisional), RVT-GII, DEDD_Tnp_IS110 (pfam01548)

Seq: LZRC01000103.1 Bacillus thuringiensis strain FN31 contig70, whole genome shotgun sequence (127288 bp)
Overview 1 RT 1: 114491-122258 bp Neighborhood of RT #1 [114491, 122569] HNH COG3950 RVT-UG12 LRAT LRAT Rep_trans Feature: gene Location: 114491-115168 bp Ori: OJE17821.1 Feature: domain Description: HNH Note: nucleases Location: 114584-114716 bp Feature: domain Description: HNH Note: nucleases Location: 114 584 -114 716 bp Feature: gene Location: 115165-116544 bp Ori: OJE17822.1 Feature: domain Description: COG3950 Location: 115168-116332 bp Feature: domain Description: COG3950 Location: 115168-116332 bp Feature: gene Location: 117868-119814 bp Ori: OJE17823.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 118210-118663 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 118210-118663 bp Feature: gene Location: 120595-121014 bp Ori: OJE17834.1 Feature: domain Description: LRAT Location: 120655-120733 bp Feature: domain Description: LRAT Location: 120655-120733 bp Feature: domain Description: LRAT Location: 120826-120916 bp Feature: domain Description: LRAT Location: 120826-120916 bp Feature: gene Location: 121850-122569 bp Feature: domain Description: Rep_trans Location: 121880-122258 bp Feature: domain Description: Rep_trans Location: 121880-122258 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNH (pfam01844), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-UG12, LRAT (pfam04970), Rep_trans (pfam02486)

Seq: LZRC01000099.1 Bacillus thuringiensis strain FN31 contig67, whole genome shotgun sequence (7402 bp)
Overview 1 RT 1: 210-4244 bp Neighborhood of RT #1 [210, 4264] RVT-GII HNHc sigpep_I_bact Feature: gene Location: 210-2141 bp Ori: OJE18323.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 534-1269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 34-1269 bp Feature: domain Description: HNHc Note: nucleases Location: 1860-2025 bp Feature: domain Description: HNHc Note: nucleases Location: 1860-2025 bp Feature: gene Location: 2918-3439 bp Feature: gene Location: 3728-4264 bp Ori: OJE18325.1 Feature: domain Description: sigpep_I_bact Location: 3806-4244 bp Feature: domain Description: sigpep_I_bact Location: 3806-4244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), sigpep_I_bact (TIGR02227)