myRT

myRT report for GCA_001883965.1_ASM188396v1

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Seq: LZQY01000040.1 Bacillus cereus strain A8S3 contig134, whole genome shotgun sequence (47470 bp)
Overview 1 RT 1: 13038-20425 bp Neighborhood of RT #1 [13038, 20439] RVT_N RVT-GII GIIM nuc_hydro DEXXQc_Upf1-like KOG1803 Feature: gene Location: 13038-13265 bp Feature: gene Location: 13431-13673 bp Feature: gene Location: 13874-15520 bp Feature: RT Description: RVT_N Location: 13916-14153 bp Feature: RT Description: RVT_N Location: 1 391 6-1 41 53 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14207-14867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4207-1 4867 bp Feature: domain Description: GIIM Note: maturase Location: 14936-15167 bp Feature: domain Description: GIIM Note: maturase Location: 1 4936-1 51 67 bp Feature: gene Location: 16240-17190 bp Feature: domain Description: nuc_hydro Location: 16255-17161 bp Feature: domain Description: nuc_hydro Location: 1 6255-1 71 61 bp Feature: gene Location: 17623-20439 bp Feature: domain Description: DEXXQc_Upf1-like Location: 18682-19891 bp Feature: domain Description: DEXXQc_Upf1 -like Location: 1 8682-1 9891 bp Feature: domain Description: KOG1803 Location: 20107-20425 bp Feature: domain Description: KOG1 803 Location: 201 07-20425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), nuc_hydro (cl00226), DEXXQc_Upf1-like (cd17934), KOG1803 (KOG1803, DNA helicase )

Seq: LZQY01000018.1 Bacillus cereus strain A8S3 contig114, whole genome shotgun sequence (172688 bp)
Overview 1 RT 1: 83587-89659 bp 2 RT 2: 105073-113025 bp 3 RT 3: 121113-127781 bp Neighborhood of RT #1 [83587, 89754] AAA_10 RVT-GII HNHc TraC-F-type AAA_10 TcpE Neighborhood of RT #2 [105073, 113756] xerC TraG-D_C RVT-GII Intron_maturas2 HNHc Replic_Relax Neighborhood of RT #3 [121113, 127789] HTH_XRE RVT-GII GIIM HNHc DUF3854 PCYCGC Feature: gene Location: 83587-84069 bp Feature: gene Location: 84071-85090 bp Feature: domain Description: AAA_10 Location: 84077-84974 bp Feature: domain Description: AAA_10 Location: 84077-84974 bp Feature: gene Location: 85207-87039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85507-86212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85507-862 12 bp Feature: domain Description: HNHc Note: nucleases Location: 86791-86923 bp Feature: domain Description: HNHc Note: nucleases Location: 86791-8692 3 bp Feature: gene Location: 87776-89290 bp Feature: domain Description: TraC-F-type Location: 88466-88964 bp Feature: domain Description: TraC-F-type Location: 88466-88964 bp Feature: domain Description: AAA_10 Location: 89117-89291 bp Feature: domain Description: AAA_10 Location: 89117-892 91 bp Feature: gene Location: 89350-89754 bp Feature: domain Description: TcpE Location: 89386-89659 bp Feature: domain Description: TcpE Location: 89386-89659 bp Feature: gene Location: 105073-106047 bp Feature: domain Description: xerC Location: 105100-105949 bp Feature: domain Description: xerC Location: 105100-105949 bp Feature: gene Location: 106614-108014 bp Feature: domain Description: TraG-D_C Location: 106761-107124 bp Feature: domain Description: TraG-D_C Location: 106761-10712 4 bp Feature: gene Location: 108115-109932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108379-109210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108379-1092 10 bp Feature: domain Description: Intron_maturas2 Location: 109288-109582 bp Feature: domain Description: Intron_maturas2 Location: 1092 88-109582 bp Feature: domain Description: HNHc Note: nucleases Location: 109729-109906 bp Feature: domain Description: HNHc Note: nucleases Location: 10972 9-109906 bp Feature: gene Location: 110549-112234 bp Feature: gene Location: 112206-113756 bp Feature: domain Description: Replic_Relax Location: 112302-113025 bp Feature: domain Description: Replic_Relax Location: 112 302 -11302 5 bp Feature: gene Location: 121113-121340 bp Feature: domain Description: HTH_XRE Location: 121167-121305 bp Feature: domain Description: HTH_XRE Location: 12 1167-12 1305 bp Feature: gene Location: 121342-122892 bp Feature: gene Location: 123953-125776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124247-124946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 42 47-12 4946 bp Feature: domain Description: GIIM Note: maturase Location: 125030-125273 bp Feature: domain Description: GIIM Note: maturase Location: 12 5030-12 52 73 bp Feature: domain Description: HNHc Note: nucleases Location: 125519-125657 bp Feature: domain Description: HNHc Note: nucleases Location: 12 5519-12 5657 bp Feature: gene Location: 125868-127052 bp Feature: domain Description: DUF3854 Location: 126699-127014 bp Feature: domain Description: DUF3854 Location: 12 6699-12 7014 bp Feature: gene Location: 127271-127789 bp Feature: domain Description: PCYCGC Location: 127346-127781 bp Feature: domain Description: PCYCGC Location: 12 7346-12 7781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, HNHc (smart00507), TraC-F-type (TIGR02746), TcpE (pfam12648), xerC (PRK01287), TraG-D_C (pfam12696), Intron_maturas2 (pfam01348), Replic_Relax (pfam13814), HTH_XRE (smart00530)
GIIM (pfam08388), DUF3854 (pfam12965), PCYCGC (pfam13798)