myRT

myRT report for GCA_001886185.1_ASM188618v1

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Seq: JXLA01000067.1 Enterococcus raffinosus strain DSM 5633 Scaffold67, whole genome shotgun sequence (9201 bp)
Overview 1 RT 1: 4438-8440 bp Neighborhood of RT #1 [4438, 8457] TcpE RVT-GII HNHc Feature: gene Location: 4438-4827 bp Feature: domain Description: TcpE Location: 4456-4756 bp Feature: domain Description: TcpE Location: 4456-4756 bp Feature: gene Location: 4934-6073 bp Feature: gene Location: 6751-8457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7048-7747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7048-7747 bp Feature: domain Description: HNHc Note: nucleases Location: 8302-8440 bp Feature: domain Description: HNHc Note: nucleases Location: 8302-8440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), RVT-GII, HNHc (smart00507)

Seq: JXLA01000084.1 Enterococcus raffinosus strain DSM 5633 Scaffold84, whole genome shotgun sequence (3156 bp)
Overview 1 RT 1: 52-2943 bp Neighborhood of RT #1 [52, 3056] FtsK_SpoIIIE RVT-GII HNHc Feature: gene Location: 52-588 bp Feature: domain Description: FtsK_SpoIIIE Location: 229-469 bp Feature: domain Description: FtsK_SpoIIIE Location: 2 2 9-469 bp Feature: gene Location: 1182-3056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548-2244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548-2 2 44 bp Feature: domain Description: HNHc Note: nucleases Location: 2784-2943 bp Feature: domain Description: HNHc Note: nucleases Location: 2 784-2 943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), FtsK_SpoIIIE (pfam01580)

Seq: JXLA01000063.1 Enterococcus raffinosus strain DSM 5633 Scaffold63, whole genome shotgun sequence (11590 bp)
Overview 1 RT 1: 6742-10308 bp Neighborhood of RT #1 [6742, 10343] Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like YitT_membrane RVT-GII KOG4768 Relaxase Feature: gene Location: 6742-7932 bp Feature: domain Description: Arm-DNA-bind_4 Location: 6835-6964 bp Feature: domain Description: Arm-DNA-bind_4 Location: 683 5-6964 bp Feature: domain Description: Phage_int_SAM_3 Location: 6991-7159 bp Feature: domain Description: Phage_int_SAM_3 Location: 6991-7159 bp Feature: domain Description: INT_ICEBs1_C_like Location: 7348-7876 bp Feature: domain Description: INT_ICEBs1_C_like Location: 73 48-7876 bp Feature: gene Location: 8411-8539 bp Feature: domain Description: YitT_membrane Location: 8441-8534 bp Feature: domain Description: YitT_membrane Location: 8441-853 4 bp Feature: gene Location: 8600-9106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8603-8969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8603 -8969 bp Feature: gene Location: 9177-9449 bp Feature: domain Description: KOG4768 Location: 9201-9402 bp Feature: domain Description: KOG4768 Location: 9201-9402 bp Feature: gene Location: 9981-10343 bp Feature: domain Description: Relaxase Location: 10011-10308 bp Feature: domain Description: Relaxase Location: 10011-103 08 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), YitT_membrane (pfam02588), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), Relaxase (pfam03432)