myRT

myRT report for GCA_001888145.1_ASM188814v1

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Seq: KV878019.1 Rhizobium pusense strain CCGM10 genomic scaffold scaffold2, whole genome shotgun sequence (329356 bp)
Overview 1 RT 1: 197250-203366 bp Neighborhood of RT #1 [197250, 203374] YncB DUF3846 RVT_N RVT-GII GIIM HxlR Feature: gene Location: 197250-197831 bp Ori: OJH51458.1 Feature: domain Description: YncB Location: 197484-197808 bp Feature: domain Description: YncB Location: 1 97484-1 97808 bp Feature: gene Location: 198260-198694 bp Ori: OJH51436.1 Feature: domain Description: DUF3846 Location: 198284-198530 bp Feature: domain Description: DUF3846 Location: 1 98284-1 98530 bp Feature: gene Location: 199000-200457 bp Ori: OJH51459.1 Feature: domain Description: RVT_N Location: 199063-199303 bp Feature: domain Description: RVT_N Location: 1 99063-1 99303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 199351-199993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 99351 -1 99993 bp Feature: domain Description: GIIM Note: maturase Location: 200044-200278 bp Feature: domain Description: GIIM Note: maturase Location: 200044-200278 bp Feature: gene Location: 201272-201595 bp Feature: gene Location: 202970-203374 bp Ori: OJH51438.1 Feature: domain Description: HxlR Location: 203030-203366 bp Feature: domain Description: HxlR Location: 203030-203366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YncB (COG1525), DUF3846 (pfam12957), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HxlR (pfam01638)

Seq: KV878044.1 Rhizobium pusense strain CCGM10 genomic scaffold C943, whole genome shotgun sequence (2251 bp)
Overview 1 RT 1: 664-1930 bp Neighborhood of RT #1 [664, 2175] RVT-GII KOG4768 Feature: gene Location: 664-2175 bp Ori: OJH51698.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 922-1654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92 2 -1654 bp Feature: domain Description: KOG4768 Location: 1813-1930 bp Feature: domain Description: KOG4768 Location: 1813-1930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )