myRT

myRT report for GCA_001888225.1_ASM188822v1

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Seq: KV878096.1 Rhizobium pusense strain CCGM11 genomic scaffold scaffold3, whole genome shotgun sequence (338776 bp)
Overview 1 RT 1: 83740-89841 bp Neighborhood of RT #1 [83740, 89864] HxlR RVT_N RVT-GII GIIM DUF3846 YncB Feature: gene Location: 83740-84144 bp Ori: OJH60892.1 Feature: domain Description: HxlR Location: 83800-84136 bp Feature: domain Description: HxlR Location: 83800-841 36 bp Feature: gene Location: 85519-85842 bp Feature: gene Location: 86657-88114 bp Ori: OJH60902.1 Feature: domain Description: RVT_N Location: 86720-86960 bp Feature: domain Description: RVT_N Location: 86720-86960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87008-87650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87008-87650 bp Feature: domain Description: GIIM Note: maturase Location: 87701-87935 bp Feature: domain Description: GIIM Note: maturase Location: 87701 -87935 bp Feature: gene Location: 88420-88854 bp Ori: OJH60894.1 Feature: domain Description: DUF3846 Location: 88444-88690 bp Feature: domain Description: DUF3846 Location: 88444-88690 bp Feature: gene Location: 89283-89864 bp Ori: OJH60903.1 Feature: domain Description: YncB Location: 89517-89841 bp Feature: domain Description: YncB Location: 8951 7-89841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3846 (pfam12957), YncB (COG1525)

Seq: KV878116.1 Rhizobium pusense strain CCGM11 genomic scaffold C1081, whole genome shotgun sequence (2251 bp)
Overview 1 RT 1: 77-1343 bp Neighborhood of RT #1 [77, 1588] RVT-GII KOG4768 Feature: gene Location: 77-1588 bp Ori: OJH56112.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335-1067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335-1067 bp Feature: domain Description: KOG4768 Location: 1226-1343 bp Feature: domain Description: KOG4768 Location: 12 2 6-1343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )