myRT

myRT report for GCA_001890625.1_106-2A

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Seq: LMTD01000002.1 Vibrio vulnificus strain 106-2A VV1062A_contig000002, whole genome shotgun sequence (866319 bp)
Overview 1 RT 1: 315707-322094 bp Neighborhood of RT #1 [315707, 322094] PRK01202 PRK05367 RVT-UG17 SLATT_5 Feature: gene Location: 315707-316087 bp Ori: OJI59046.1 Gene: gcvH Feature: domain Description: PRK01202 Location: 315713-316079 bp Feature: domain Description: PRK01 202 Location: 31 571 3-31 6079 bp Feature: gene Location: 316192-319056 bp Ori: OJI59047.1 Gene: gcvP Feature: domain Description: PRK05367 Location: 316213-319051 bp Feature: domain Description: PRK05367 Location: 31 621 3-31 9051 bp Feature: gene Location: 319259-320593 bp Ori: OJI59048.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 319481-320063 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 31 9481 -320063 bp Feature: gene Location: 320593-321159 bp Ori: OJI59049.1 Feature: domain Description: SLATT_5 Location: 320602-321133 bp Feature: domain Description: SLATT_5 Location: 320602-321 1 33 bp Feature: gene Location: 321690-322094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK01202 (glycine cleavage system protein GcvH), PRK05367 (aminomethyl-transferring glycine dehydrogenase), RVT-UG17, SLATT_5 (pfam18160)

Seq: LMTD01000012.1 Vibrio vulnificus strain 106-2A VV1062A_contig000012, whole genome shotgun sequence (83564 bp)
Overview 1 RT 1: 38716-43684 bp Neighborhood of RT #1 [38716, 43821] LolD PRK07883 RVT-Retrons Ntn_CGH Feature: gene Location: 38716-39408 bp Ori: OJI56028.1 Gene: macB_3 Feature: domain Description: LolD Location: 38737-39394 bp Feature: domain Description: LolD Location: 38737-39394 bp Feature: gene Location: 39448-40062 bp Ori: OJI56029.1 Gene: polC_4 Feature: domain Description: PRK07883 Location: 39466-39982 bp Feature: domain Description: PRK07883 Location: 39466-39982 bp Feature: gene Location: 40636-41808 bp Ori: OJI56030.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40780-41353 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40780-41353 bp Feature: gene Location: 41808-42530 bp Feature: gene Location: 42766-43821 bp Ori: OJI56032.1 Feature: domain Description: Ntn_CGH Location: 42775-43684 bp Feature: domain Description: Ntn_CGH Location: 42 775-43684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LolD (COG1136), PRK07883 (DEDD exonuclease domain-containing protein), RVT-Retrons, Ntn_CGH (cd01902)