myRT

myRT report for GCA_001890655.1_ASM189065v1

Download annotations/find similar RTs

Seq: LMTE01000014.1 Vibrio fluvialis strain NCTC 11327 VFL11327_contig000014, whole genome shotgun sequence (83306 bp)
Overview 1 RT 1: 38810-43778 bp Neighborhood of RT #1 [38810, 43915] LolD PRK07883 RVT-Retrons Ntn_CGH Feature: gene Location: 38810-39502 bp Ori: OJI55117.1 Gene: macB_3 Feature: domain Description: LolD Location: 38831-39488 bp Feature: domain Description: LolD Location: 38831 -39488 bp Feature: gene Location: 39542-40156 bp Ori: OJI55118.1 Gene: polC_5 Feature: domain Description: PRK07883 Location: 39560-40076 bp Feature: domain Description: PRK07883 Location: 39560-40076 bp Feature: gene Location: 40730-41902 bp Ori: OJI55119.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40874-41447 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40874-41 447 bp Feature: gene Location: 41902-42624 bp Feature: gene Location: 42860-43915 bp Ori: OJI55121.1 Feature: domain Description: Ntn_CGH Location: 42869-43778 bp Feature: domain Description: Ntn_CGH Location: 42869-43778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LolD (COG1136), PRK07883 (DEDD exonuclease domain-containing protein), RVT-Retrons, Ntn_CGH (cd01902)

Seq: LMTE01000003.1 Vibrio fluvialis strain NCTC 11327 VFL11327_contig000003, whole genome shotgun sequence (756319 bp)
Overview 1 RT 1: 532651-539030 bp Neighborhood of RT #1 [532651, 539038] SLATT_5 RVT-UG17 PRK05367 PRK01202 Feature: gene Location: 532651-533055 bp Feature: gene Location: 533586-534152 bp Ori: OJI58593.1 Feature: domain Description: SLATT_5 Location: 533595-534126 bp Feature: domain Description: SLATT_5 Location: 533595-53412 6 bp Feature: gene Location: 534152-535486 bp Ori: OJI58594.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 534374-534956 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 534374-534956 bp Feature: gene Location: 535689-538553 bp Ori: OJI58595.1 Gene: gcvP Feature: domain Description: PRK05367 Location: 535710-538548 bp Feature: domain Description: PRK05367 Location: 535710-538548 bp Feature: gene Location: 538658-539038 bp Ori: OJI58596.1 Gene: gcvH Feature: domain Description: PRK01202 Location: 538664-539030 bp Feature: domain Description: PRK012 02 Location: 538664-539030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, PRK05367 (aminomethyl-transferring glycine dehydrogenase), PRK01202 (glycine cleavage system protein GcvH)