myRT

myRT report for GCA_001891685.1_ASM189168v1

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Seq: MOGG01000072.1 Escherichia coli strain 578 BN4_578_1_(paired)_contig_72, whole genome shotgun sequence (24469 bp)
Overview 1 RT 1: 17648-23508 bp Neighborhood of RT #1 [17648, 23543] SapB DDE_Tnp_1_5 RVT-GII DcuC PRK13381 Feature: gene Location: 17648-18361 bp Ori: OJM12442.1 Feature: domain Description: SapB Location: 17705-18353 bp Feature: domain Description: SapB Location: 1 7705-1 8353 bp Feature: gene Location: 18522-19445 bp Ori: OJM12447.1 Feature: domain Description: DDE_Tnp_1_5 Location: 18579-18912 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 1 8579-1 891 2 bp Feature: gene Location: 19837-20283 bp Ori: OJM12443.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20143-20245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 43-20245 bp Feature: gene Location: 20929-22290 bp Ori: OJM12444.1 Feature: domain Description: DcuC Location: 20932-22264 bp Feature: domain Description: DcuC Location: 20932-22264 bp Feature: gene Location: 22287-23543 bp Ori: OJM12445.1 Feature: domain Description: PRK13381 Location: 22293-23508 bp Feature: domain Description: PRK1 3381 Location: 22293-23508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SapB (smart00741), DDE_Tnp_1_5 (pfam13737), RVT-GII, DcuC (TIGR00771), PRK13381 (peptidase T; Provisional)