myRT

myRT report for GCA_001892045.1_ASM189204v1

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Seq: MOHE01000035.1 Escherichia coli strain 468 BN4_468_1_(paired)_contig_35, whole genome shotgun sequence (62776 bp)
Overview 1 RT 1: 39393-50332 bp Neighborhood of RT #1 [39393, 50332] Psu RVT-UG7 PRK09692 DUF4062 HTH_XRE RVT-Retrons Resolvase Feature: gene Location: 39393-39965 bp Ori: OJN42500.1 Feature: domain Description: Psu Location: 39411-39948 bp Feature: domain Description: Psu Location: 3941 1 -39948 bp Feature: gene Location: 40268-41008 bp Feature: gene Location: 41005-42633 bp Ori: OJN42502.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 41413-41842 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 41 41 3-41 842 bp Feature: gene Location: 42626-43810 bp Ori: OJN42503.1 Feature: domain Description: PRK09692 Location: 42632-43787 bp Feature: domain Description: PRK09692 Location: 42632-43787 bp Feature: gene Location: 44519-45700 bp Ori: OJN42504.1 Feature: domain Description: DUF4062 Location: 44534-44861 bp Feature: domain Description: DUF4062 Location: 44534-44861 bp Feature: gene Location: 45731-46192 bp Ori: OJN42505.1 Feature: domain Description: HTH_XRE Location: 45761-45929 bp Feature: domain Description: HTH_XRE Location: 45761 -45929 bp Feature: gene Location: 46432-46929 bp Feature: gene Location: 47066-48772 bp Ori: OJN42506.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47216-47813 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4721 6-4781 3 bp Feature: gene Location: 49040-49705 bp Ori: OJN42507.1 Feature: domain Description: Resolvase Location: 49061-49478 bp Feature: domain Description: Resolvase Location: 49061 -49478 bp Feature: gene Location: 49988-50332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG7, PRK09692 (Integrase; provisional), DUF4062 (pfam13271), HTH_XRE (smart00530), RVT-Retrons, Resolvase (smart00857)