myRT

myRT report for GCA_001892445.1_ASM189244v1

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Seq: MOFS01000019.1 Escherichia coli strain 585 BN4_585_1_(paired)_contig_19, whole genome shotgun sequence (141526 bp)
Overview 1 RT 1: 90056-96059 bp Neighborhood of RT #1 [90056, 96076] Phage_int_SAM_5 INT_C_like_1 PRK09692 RVT-UG7 Psu Feature: gene Location: 90056-91390 bp Ori: OJL42300.1 Feature: domain Description: Phage_int_SAM_5 Location: 90425-90662 bp Feature: domain Description: Phage_int_SAM_5 Location: 90425-90662 bp Feature: domain Description: INT_C_like_1 Location: 90758-91274 bp Feature: domain Description: INT_C_like_1 Location: 90758-91 274 bp Feature: gene Location: 91659-92843 bp Ori: OJL42301.1 Feature: domain Description: PRK09692 Location: 91665-92820 bp Feature: domain Description: PRK09692 Location: 91 665-92820 bp Feature: gene Location: 92836-94464 bp Ori: OJL42302.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 93244-93673 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 93244-93673 bp Feature: gene Location: 94461-95201 bp Feature: gene Location: 95504-96076 bp Ori: OJL42304.1 Feature: domain Description: Psu Location: 95522-96059 bp Feature: domain Description: Psu Location: 95522-96059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_5 (pfam13102), INT_C_like_1 (cd01184), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: MOFS01000080.1 Escherichia coli strain 585 BN4_585_1_(paired)_contig_80, whole genome shotgun sequence (2374 bp)
Overview 1 RT 1: 122-1754 bp Neighborhood of RT #1 [122, 1789] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 122-1789 bp Ori: OJL39754.1 Feature: domain Description: RVT_N Location: 170-407 bp Feature: domain Description: RVT_N Location: 170-407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 458-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 458-1100 bp Feature: domain Description: GIIM Note: maturase Location: 1151-1385 bp Feature: domain Description: GIIM Note: maturase Location: 1151-1385 bp Feature: domain Description: HNHc Note: nucleases Location: 1595-1754 bp Feature: domain Description: HNHc Note: nucleases Location: 1595-1754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)