myRT

myRT report for GCA_001892745.1_ASM189274v1

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Seq: MOHP01000002.1 Escherichia coli strain 507 BN4_507_1_(paired)_contig_2, whole genome shotgun sequence (125845 bp)
Overview 1 RT 1: 1-6986 bp 2 RT 2: 44355-46836 bp Neighborhood of RT #1 [1, 7702] AidA YeeP RVT-UG1 GerD HEPN_Apea Neighborhood of RT #2 [44355, 46841] IS285 group_II_RT_mat RVT-GII InsE PHA02517 Feature: gene Location: 1-324 bp Ori: OJO08627.1 Feature: domain Description: AidA Location: 40-325 bp Feature: domain Description: AidA Location: 40-325 bp Feature: gene Location: 697-1569 bp Ori: OJO08628.1 Feature: domain Description: YeeP Location: 700-1567 bp Feature: domain Description: YeeP Location: 700-1 567 bp Feature: gene Location: 2173-5862 bp Ori: OJO08629.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2785-3295 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2785-3295 bp Feature: gene Location: 5871-6305 bp Ori: OJO08630.1 Feature: domain Description: GerD Location: 5949-6063 bp Feature: domain Description: GerD Location: 5949-6063 bp Feature: gene Location: 6602-7702 bp Ori: OJO08631.1 Feature: domain Description: HEPN_Apea Location: 6671-6986 bp Feature: domain Description: HEPN_Apea Location: 6671 -6986 bp Feature: gene Location: 44355-44837 bp Ori: OJO08662.1 Feature: domain Description: IS285 Location: 44385-44763 bp Feature: domain Description: IS285 Location: 44385-44763 bp Feature: gene Location: 44976-45216 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 44988-45201 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 44988-45201 bp Feature: gene Location: 45185-45421 bp Ori: OJO08663.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45188-45368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451 88-45368 bp Feature: gene Location: 45697-45999 bp Ori: OJO08664.1 Feature: domain Description: InsE Location: 45700-45985 bp Feature: domain Description: InsE Location: 45700-45985 bp Feature: gene Location: 46035-46841 bp Ori: OJO08665.1 Feature: domain Description: PHA02517 Location: 46050-46836 bp Feature: domain Description: PHA0251 7 Location: 46050-46836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AidA (COG3468), YeeP (COG3596), RVT-UG1, GerD (pfam17898), HEPN_Apea (pfam18739), IS285 (COG3328), group_II_RT_mat (TIGR04416), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)

Seq: MOHP01000052.1 Escherichia coli strain 507 BN4_507_1_(paired)_contig_52, whole genome shotgun sequence (27675 bp)
Overview 1 RT 1: 20456-26298 bp Neighborhood of RT #1 [20456, 26333] DUF5339 Asparaginase_2 RVT-GII DcuC PRK13381 Feature: gene Location: 20456-20734 bp Ori: OJO02308.1 Feature: domain Description: DUF5339 Location: 20519-20720 bp Feature: domain Description: DUF5339 Location: 2 0519-2 072 0 bp Feature: gene Location: 21072-22094 bp Ori: OJO02313.1 Feature: domain Description: Asparaginase_2 Location: 21153-22086 bp Feature: domain Description: Asparaginase_2 Location: 2 1153-2 2 086 bp Feature: gene Location: 22627-23073 bp Ori: OJO02309.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22933-23035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 933-2 3035 bp Feature: gene Location: 23719-25080 bp Ori: OJO02310.1 Feature: domain Description: DcuC Location: 23722-25054 bp Feature: domain Description: DcuC Location: 2 372 2 -2 5054 bp Feature: gene Location: 25077-26333 bp Ori: OJO02311.1 Feature: domain Description: PRK13381 Location: 25083-26298 bp Feature: domain Description: PRK13381 Location: 2 5083-2 62 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5339 (pfam17274), Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771), PRK13381 (peptidase T; Provisional)

Seq: MOHP01000006.1 Escherichia coli strain 507 BN4_507_1_(paired)_contig_6, whole genome shotgun sequence (13600 bp)
Overview 1 RT 1: 9959-13130 bp Neighborhood of RT #1 [9959, 13132] PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 9959-10390 bp Ori: OJO07904.1 Feature: domain Description: PRK10276 Location: 10010-10373 bp Feature: domain Description: PRK10276 Location: 10010-103 73 bp Feature: gene Location: 10967-11161 bp Feature: gene Location: 11273-12283 bp Ori: OJO07905.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11279-11891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11279-11891 bp Feature: gene Location: 12435-12710 bp Ori: OJO07906.1 Feature: domain Description: InsA Location: 12441-12705 bp Feature: domain Description: InsA Location: 12441-12705 bp Feature: gene Location: 12629-13132 bp Ori: OJO07907.1 Feature: domain Description: DDE_Tnp_IS1 Location: 12740-13130 bp Feature: domain Description: DDE_Tnp_IS1 Location: 12740-13 13 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)