myRT

myRT report for GCA_001892905.1_ASM189290v1

Download annotations/find similar RTs

Seq: MOHZ01000070.1 Escherichia coli strain 653 BN4_653_1_(paired)_contig_70, whole genome shotgun sequence (22248 bp)
Overview 1 RT 1: 2182-7611 bp Neighborhood of RT #1 [2182, 7619] DcuC group_II_RT_mat RVT-GII DDE_Tnp_1_5 Asparaginase_2 Feature: gene Location: 2182-3543 bp Ori: OJO48852.1 Feature: domain Description: DcuC Location: 2185-3517 bp Feature: domain Description: DcuC Location: 21 85-351 7 bp Feature: gene Location: 4189-4807 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4351-4510 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4351 -451 0 bp Feature: gene Location: 4766-5116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4769-5111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4769-51 1 1 bp Feature: gene Location: 5495-6418 bp Ori: OJO48853.1 Feature: domain Description: DDE_Tnp_1_5 Location: 5552-5885 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 5552-5885 bp Feature: gene Location: 6597-7619 bp Ori: OJO48864.1 Feature: domain Description: Asparaginase_2 Location: 6678-7611 bp Feature: domain Description: Asparaginase_2 Location: 6678-761 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), group_II_RT_mat (TIGR04416), RVT-GII, DDE_Tnp_1_5 (pfam13737), Asparaginase_2 (pfam01112)

Seq: MOHZ01000144.1 Escherichia coli strain 653 BN4_653_1_(paired)_contig_146, whole genome shotgun sequence (694 bp)
Overview 1 RT 1: 1-685 bp Neighborhood of RT #1 [1, 694] RVT-GII Feature: gene Location: 1-694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97-685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97-685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII