myRT

myRT report for GCA_001893455.1_ASM189345v1

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Seq: MOJC01000032.1 Escherichia coli strain 496 BN4_496_1_(paired)_contig_32, whole genome shotgun sequence (141521 bp)
Overview 1 RT 1: 90055-96057 bp Neighborhood of RT #1 [90055, 96074] Phage_int_SAM_5 INT_C_like_1 PRK09692 RVT-UG7 Psu Feature: gene Location: 90055-91389 bp Ori: OJP96845.1 Feature: domain Description: Phage_int_SAM_5 Location: 90424-90661 bp Feature: domain Description: Phage_int_SAM_5 Location: 90424-90661 bp Feature: domain Description: INT_C_like_1 Location: 90757-91273 bp Feature: domain Description: INT_C_like_1 Location: 90757-91 273 bp Feature: gene Location: 91658-92842 bp Ori: OJP96846.1 Feature: domain Description: PRK09692 Location: 91664-92819 bp Feature: domain Description: PRK09692 Location: 91 664-9281 9 bp Feature: gene Location: 92835-94462 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 93243-93672 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 93243-93672 bp Feature: gene Location: 94459-95199 bp Feature: gene Location: 95502-96074 bp Ori: OJP96848.1 Feature: domain Description: Psu Location: 95520-96057 bp Feature: domain Description: Psu Location: 95520-96057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_5 (pfam13102), INT_C_like_1 (cd01184), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: MOJC01000088.1 Escherichia coli strain 496 BN4_496_1_(paired)_contig_88, whole genome shotgun sequence (2373 bp)
Overview 1 RT 1: 586-2218 bp Neighborhood of RT #1 [586, 2253] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 586-2253 bp Ori: OJP92855.1 Feature: domain Description: RVT_N Location: 634-871 bp Feature: domain Description: RVT_N Location: 634-871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 922-1564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92 2 -1564 bp Feature: domain Description: GIIM Note: maturase Location: 1615-1849 bp Feature: domain Description: GIIM Note: maturase Location: 1615-1849 bp Feature: domain Description: HNHc Note: nucleases Location: 2059-2218 bp Feature: domain Description: HNHc Note: nucleases Location: 2 059-2 2 18 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: MOJC01000252.1 Escherichia coli strain 496 BN4_496_1_(paired)_contig_252, whole genome shotgun sequence (2104 bp)
Overview 1 RT 1: 1-1698 bp Neighborhood of RT #1 [1, 1859] RAYT RVT-GII GIIM Feature: gene Location: 1-326 bp Feature: domain Description: RAYT Location: 46-322 bp Feature: domain Description: RAYT Location: 46-3 22 bp Feature: gene Location: 513-1859 bp Ori: OJP88494.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1419 bp Feature: domain Description: GIIM Note: maturase Location: 1467-1698 bp Feature: domain Description: GIIM Note: maturase Location: 1467-1698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAYT (COG1943), RVT-GII, GIIM (pfam08388)