myRT

myRT report for GCA_001893625.1_ASM189362v1

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Seq: MOKA01000049.1 Escherichia coli strain 675 BN4_675_1_(paired)_contig_49, whole genome shotgun sequence (128453 bp)
Overview 1 RT 1: 99866-105975 bp Neighborhood of RT #1 [99866, 106034] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Feature: gene Location: 99866-100786 bp Ori: OJR12785.1 Feature: domain Description: AbiEii Location: 99908-100649 bp Feature: domain Description: AbiEii Location: 99908-1 00649 bp Feature: gene Location: 100773-101555 bp Ori: OJR12786.1 Feature: domain Description: AbiEi_3_N Location: 100785-101046 bp Feature: domain Description: AbiEi_3_N Location: 1 00785-1 01 046 bp Feature: domain Description: AbiEi_3 Location: 101058-101514 bp Feature: domain Description: AbiEi_3 Location: 1 01 058-1 01 51 4 bp Feature: gene Location: 101871-105080 bp Ori: OJR12787.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 102399-102888 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 02399-1 02888 bp Feature: domain Description: nitrilase Location: 104394-104991 bp Feature: domain Description: nitrilase Location: 1 04394-1 04991 bp Feature: gene Location: 105427-105897 bp Feature: gene Location: 105894-106034 bp Ori: OJR12789.1 Feature: domain Description: SfsB Location: 105903-105975 bp Feature: domain Description: SfsB Location: 1 05903-1 05975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), SfsB (COG3423)

Seq: MOKA01000014.1 Escherichia coli strain 675 BN4_675_1_(paired)_contig_14, whole genome shotgun sequence (26507 bp)
Overview 1 RT 1: 118-3533 bp Neighborhood of RT #1 [118, 3538] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 118-591 bp Feature: domain Description: PHA02517 Location: 133-583 bp Feature: domain Description: PHA02 517 Location: 133-583 bp Feature: gene Location: 660-2168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 918-1650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 918-1650 bp Feature: domain Description: GIIM Note: maturase Location: 1725-1944 bp Feature: domain Description: GIIM Note: maturase Location: 172 5-1944 bp Feature: gene Location: 2775-3242 bp Ori: OJR16533.1 Feature: domain Description: PHA02517 Location: 2841-3180 bp Feature: domain Description: PHA02 517 Location: 2 841-3180 bp Feature: gene Location: 3239-3538 bp Ori: OJR16534.1 Feature: domain Description: InsE Location: 3269-3533 bp Feature: domain Description: InsE Location: 32 69-3533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: MOKA01000084.1 Escherichia coli strain 675 BN4_675_1_(paired)_contig_84, whole genome shotgun sequence (22261 bp)
Overview 1 RT 1: 13-2980 bp Neighborhood of RT #1 [13, 3014] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 13-384 bp Feature: gene Location: 299-724 bp Feature: gene Location: 693-2201 bp Ori: OJR11915.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951-1683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951-1683 bp Feature: domain Description: GIIM Note: maturase Location: 1758-1956 bp Feature: domain Description: GIIM Note: maturase Location: 1758-1956 bp Feature: gene Location: 2282-2770 bp Feature: domain Description: PHA02517 Location: 2285-2759 bp Feature: domain Description: PHA02517 Location: 2285-2759 bp Feature: gene Location: 2779-3014 bp Feature: domain Description: InsE Location: 2794-2980 bp Feature: domain Description: InsE Location: 2794-2980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)