myRT

myRT report for GCA_001894075.1_ASM189407v1

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Seq: MOJU01000106.1 Escherichia coli strain 571 BN4_571_1_(paired)_contig_106, whole genome shotgun sequence (10672 bp)
Overview 1 RT 1: 13-4745 bp Neighborhood of RT #1 [13, 4753] RVT-GII GIIM PHA02517 LldP Feature: gene Location: 13-384 bp Feature: gene Location: 299-724 bp Feature: gene Location: 693-2201 bp Ori: OJQ78307.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951-1683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951 -1 683 bp Feature: domain Description: GIIM Note: maturase Location: 1758-1956 bp Feature: domain Description: GIIM Note: maturase Location: 1 758-1 956 bp Feature: gene Location: 2282-2770 bp Feature: domain Description: PHA02517 Location: 2285-2759 bp Feature: domain Description: PHA0251 7 Location: 2285-2759 bp Feature: gene Location: 3200-4753 bp Ori: OJQ78300.1 Feature: domain Description: LldP Location: 3212-4745 bp Feature: domain Description: LldP Location: 321 2-4745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), LldP (COG1620)

Seq: MOJU01000005.1 Escherichia coli strain 571 BN4_571_1_(paired)_contig_5, whole genome shotgun sequence (183676 bp)
Overview 1 RT 1: 107477-114047 bp Neighborhood of RT #1 [107477, 114070] PRK09678 RVT-UG3 RVT-UG8 PBP2_CrgA_like_5 XdhC Feature: gene Location: 107477-108238 bp Feature: gene Location: 108238-108510 bp Ori: OJQ87860.1 Feature: domain Description: PRK09678 Location: 108247-108409 bp Feature: domain Description: PRK09678 Location: 1082 47-108409 bp Feature: gene Location: 108896-110173 bp Ori: OJQ87861.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 109184-109679 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 109184-109679 bp Feature: gene Location: 110164-112182 bp Ori: OJQ87862.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 110737-111190 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 110737-111190 bp Feature: gene Location: 112725-113135 bp Ori: OJQ87863.1 Feature: domain Description: PBP2_CrgA_like_5 Location: 112797-113109 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 112 797-113109 bp Feature: gene Location: 113114-114070 bp Ori: OJQ87864.1 Feature: domain Description: XdhC Location: 113192-114047 bp Feature: domain Description: XdhC Location: 113192 -114047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3, RVT-UG8, PBP2_CrgA_like_5 (cd08474), XdhC (COG1975)