myRT

myRT report for GCA_001894395.1_ASM189439v1

Download annotations/find similar RTs

Seq: MOJX01000010.1 Escherichia coli strain 708 BN4_708_1_(paired)_contig_10, whole genome shotgun sequence (267933 bp)
Overview 1 RT 1: 8062-14192 bp Neighborhood of RT #1 [8062, 14194] Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Caudo_TAP RVT-Retrons TIR_2 PRK10597 prfC Feature: gene Location: 8062-9135 bp Feature: domain Description: Collar Location: 8443-8581 bp Feature: domain Description: Collar Location: 8443-8581 bp Feature: domain Description: Phage_fiber Location: 8632-8671 bp Feature: domain Description: Phage_fiber Location: 8632-8671 bp Feature: domain Description: Phage_fiber Location: 8728-8767 bp Feature: domain Description: Phage_fiber Location: 8728-8767 bp Feature: domain Description: Phage_fiber Location: 8941-8977 bp Feature: domain Description: Phage_fiber Location: 8941 -8977 bp Feature: domain Description: Phage_fiber Location: 8983-9013 bp Feature: domain Description: Phage_fiber Location: 8983-901 3 bp Feature: gene Location: 9135-9719 bp Feature: domain Description: Caudo_TAP Location: 9351-9708 bp Feature: domain Description: Caudo_TAP Location: 9351 -9708 bp Feature: gene Location: 10164-11768 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10455-11046 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0455-1 1 046 bp Feature: domain Description: TIR_2 Location: 11373-11661 bp Feature: domain Description: TIR_2 Location: 1 1 373-1 1 661 bp Feature: gene Location: 12128-12388 bp Feature: domain Description: PRK10597 Location: 12131-12371 bp Feature: domain Description: PRK1 0597 Location: 1 21 31 -1 2371 bp Feature: gene Location: 12608-14194 bp Feature: domain Description: prfC Location: 12626-14192 bp Feature: domain Description: prfC Location: 1 2626-1 41 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR_2 (pfam13676), PRK10597 (DNA damage-inducible protein I; Provisional), prfC (TIGR00503), Collar (pfam07484), Phage_fiber (pfam03335), Caudo_TAP (pfam02413)