myRT

myRT report for GCA_001894625.1_ASM189462v1

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Seq: MOKY01000033.1 Escherichia coli strain 725 BN4_725_1_(paired)_contig_33, whole genome shotgun sequence (128922 bp)
Overview 1 RT 1: 77451-83459 bp Neighborhood of RT #1 [77451, 83476] proA PRK09692 RVT-UG7 Psu Feature: gene Location: 77451-78704 bp Ori: OJS37650.1 Feature: domain Description: proA Location: 77478-78669 bp Feature: domain Description: proA Location: 77478-78669 bp Feature: gene Location: 79059-80243 bp Ori: OJS37651.1 Feature: domain Description: PRK09692 Location: 79065-80220 bp Feature: domain Description: PRK09692 Location: 79065-80220 bp Feature: gene Location: 80236-81864 bp Ori: OJS37652.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 80644-81073 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 80644-81 073 bp Feature: gene Location: 81861-82601 bp Feature: gene Location: 82904-83476 bp Ori: OJS37654.1 Feature: domain Description: Psu Location: 82922-83459 bp Feature: domain Description: Psu Location: 82922-83459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: MOKY01000140.1 Escherichia coli strain 725 BN4_725_1_(paired)_contig_140, whole genome shotgun sequence (2407 bp)
Overview 1 RT 1: 83-1715 bp Neighborhood of RT #1 [83, 1750] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 83-1750 bp Ori: OJS32177.1 Feature: domain Description: RVT_N Location: 131-368 bp Feature: domain Description: RVT_N Location: 131-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419-1061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419-1061 bp Feature: domain Description: GIIM Note: maturase Location: 1112-1346 bp Feature: domain Description: GIIM Note: maturase Location: 1112 -1346 bp Feature: domain Description: HNHc Note: nucleases Location: 1556-1715 bp Feature: domain Description: HNHc Note: nucleases Location: 1556-1715 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)