myRT

myRT report for GCA_001894825.1_ASM189482v1

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Seq: BCWY01000001.1 Rhodococcus jostii NBRC 16295 DNA, contig: RJ1_CON00110, whole genome shotgun sequence (308680 bp)
Overview 1 RT 1: 306107-308673 bp Neighborhood of RT #1 [306107, 308678] RVT-GII GIIM Feature: gene Location: 306107-306256 bp Feature: gene Location: 306421-306897 bp Feature: gene Location: 307524-308678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307779-308412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307779-30841 2 bp Feature: domain Description: GIIM Note: maturase Location: 308502-308673 bp Feature: domain Description: GIIM Note: maturase Location: 308502-308673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BCWY01000094.1 Rhodococcus jostii NBRC 16295 DNA, contig: RJ1_CON08610, whole genome shotgun sequence (32504 bp)
Overview 1 RT 1: 1-2843 bp Neighborhood of RT #1 [1, 4063] Tra8 RVT-GII GIIM RHH_1 Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 1-189 bp Feature: domain Description: Tra8 Location: 79-187 bp Feature: domain Description: Tra8 Location: 79-187 bp Feature: gene Location: 371-1105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374-659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374-659 bp Feature: domain Description: GIIM Note: maturase Location: 734-941 bp Feature: domain Description: GIIM Note: maturase Location: 734-941 bp Feature: gene Location: 1232-1579 bp Feature: domain Description: RHH_1 Location: 1442-1553 bp Feature: domain Description: RHH_1 Location: 1442 -1553 bp Feature: gene Location: 1712-4063 bp Feature: domain Description: Resolvase Location: 1724-2162 bp Feature: domain Description: Resolvase Location: 172 4-2 162 bp Feature: domain Description: Recombinase Location: 2252-2615 bp Feature: domain Description: Recombinase Location: 2 2 52 -2 615 bp Feature: domain Description: Zn_ribbon_recom Location: 2654-2843 bp Feature: domain Description: Zn_ribbon_recom Location: 2 654-2 843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RHH_1 (pfam01402), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388)

Seq: BCWY01000139.1 Rhodococcus jostii NBRC 16295 DNA, contig: RJ1_CON12910, whole genome shotgun sequence (17263 bp)
Overview 1 RT 1: 3-5741 bp Neighborhood of RT #1 [3, 5902] COG3552 MoxR RVT-GII GIIM DDE_Tnp_1_4 SDR_c Feature: gene Location: 3-278 bp Feature: domain Description: COG3552 Location: 54-252 bp Feature: domain Description: COG3 552 Location: 54-252 bp Feature: gene Location: 275-1168 bp Feature: domain Description: MoxR Location: 287-1154 bp Feature: domain Description: MoxR Location: 287-1154 bp Feature: gene Location: 1801-3183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2122-2752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2122-2752 bp Feature: domain Description: GIIM Note: maturase Location: 2842-3049 bp Feature: domain Description: GIIM Note: maturase Location: 2842-3 049 bp Feature: gene Location: 3345-4904 bp Feature: domain Description: DDE_Tnp_1_4 Location: 3360-4368 bp Feature: domain Description: DDE_Tnp_1_4 Location: 3 3 60-43 68 bp Feature: gene Location: 5063-5902 bp Feature: domain Description: SDR_c Location: 5090-5741 bp Feature: domain Description: SDR_c Location: 5090-5741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), MoxR (COG0714), COG3552 (CoxE;Uncharacterized conserved protein, contains von Willebrand factor type A (vWA) domain ), SDR_c (cd05233)