myRT

myRT report for GCA_001894845.1_ASM189484v1

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Seq: BCWZ01000021.1 Rhodococcus koreensis JCM 10743 = NBRC 100607 DNA, contig: RK1_CON0008_0002, whole genome shotgun sequence (213646 bp)
Overview 1 RT 1: 65129-70520 bp Neighborhood of RT #1 [65129, 70525] MhpC NfsA_FRP RVT-Retrons TIGR00004 GlnQ Feature: gene Location: 65129-65941 bp Feature: domain Description: MhpC Location: 65156-65927 bp Feature: domain Description: MhpC Location: 651 56-65927 bp Feature: gene Location: 66028-66957 bp Feature: domain Description: NfsA_FRP Location: 66220-66880 bp Feature: domain Description: NfsA_FRP Location: 66220-66880 bp Feature: gene Location: 67637-69109 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68120-68711 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 681 20-6871 1 bp Feature: gene Location: 69320-69703 bp Feature: domain Description: TIGR00004 Location: 69332-69689 bp Feature: domain Description: TIGR00004 Location: 69332-69689 bp Feature: gene Location: 69761-70525 bp Feature: domain Description: GlnQ Location: 69776-70520 bp Feature: domain Description: GlnQ Location: 69776-70520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), NfsA_FRP, RVT-Retrons, TIGR00004 (reactive intermediate/imine deaminase), GlnQ (COG1126)

Seq: BCWZ01000095.1 Rhodococcus koreensis JCM 10743 = NBRC 100607 DNA, contig: RK1_CON0055_0001, whole genome shotgun sequence (25338 bp)
Overview 1 RT 1: 20553-25196 bp Neighborhood of RT #1 [20553, 25336] DDE_Tnp_1_4 RVT-GII Feature: gene Location: 20553-21017 bp Feature: gene Location: 22647-23663 bp Feature: domain Description: DDE_Tnp_1_4 Location: 22653-23574 bp Feature: domain Description: DDE_Tnp_1_4 Location: 2 2 653-2 3574 bp Feature: gene Location: 24158-25336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24500-25196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4500-2 5196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_4 (pfam13701), RVT-GII