myRT

myRT report for GCA_001896645.1_ASM189664v1

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Seq: MPPE01000053.1 Tepidanaerobacter sp. EBM-49 k99_13765, whole genome shotgun sequence (69409 bp)
Overview 1 RT 1: 43092-48154 bp Neighborhood of RT #1 [43092, 48177] ALDH_LactADH-AldA group_II_RT_mat RVT-GII RVT-GII Tra5 DapA Feature: gene Location: 43092-44528 bp Feature: domain Description: ALDH_LactADH-AldA Location: 43113-44520 bp Feature: domain Description: ALDH_LactADH-AldA Location: 431 1 3-44520 bp Feature: gene Location: 45090-45440 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 45264-45411 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 45264-4541 1 bp Feature: gene Location: 45477-45707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45480-45705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45480-45705 bp Feature: gene Location: 45749-45928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45758-45878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45758-45878 bp Feature: gene Location: 46823-47023 bp Feature: domain Description: Tra5 Location: 46844-47009 bp Feature: domain Description: Tra5 Location: 46844-47009 bp Feature: gene Location: 47263-48177 bp Feature: domain Description: DapA Location: 47281-48154 bp Feature: domain Description: DapA Location: 47281 -481 54 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ALDH_LactADH-AldA (cd07088), group_II_RT_mat (TIGR04416), RVT-GII, Tra5 (COG2801), DapA (COG0329)

Seq: MPPE01000004.1 Tepidanaerobacter sp. EBM-49 k99_15243, whole genome shotgun sequence (66238 bp)
Overview 1 RT 1: 2120-7201 bp Neighborhood of RT #1 [2120, 7215] RocR PHA02517 RVT_N RVT-GII GIIM PHA02517 Feature: gene Location: 2120-4054 bp Feature: domain Description: RocR Location: 2315-4040 bp Feature: domain Description: RocR Location: 2 315-4040 bp Feature: gene Location: 4508-4831 bp Feature: domain Description: PHA02517 Location: 4577-4760 bp Feature: domain Description: PHA02 517 Location: 4577-4760 bp Feature: gene Location: 4858-6339 bp Feature: domain Description: RVT_N Location: 4930-5173 bp Feature: domain Description: RVT_N Location: 4930-5173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5221-5878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 2 1-5878 bp Feature: domain Description: GIIM Note: maturase Location: 5929-6166 bp Feature: domain Description: GIIM Note: maturase Location: 592 9-6166 bp Feature: gene Location: 6774-6926 bp Feature: gene Location: 6946-7215 bp Feature: domain Description: PHA02517 Location: 6949-7201 bp Feature: domain Description: PHA02 517 Location: 6949-72 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RocR (COG3829), PHA02517 (putative transposase OrfB; Reviewed), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MPPE01000029.1 Tepidanaerobacter sp. EBM-49 k99_16644, whole genome shotgun sequence (54379 bp)
Overview 1 RT 1: 48479-53969 bp Neighborhood of RT #1 [48479, 54043] HK_WalK PRK11360 OmpR RVT-GII GIIM Rep_1 Feature: gene Location: 48479-49921 bp Feature: domain Description: HK_WalK Location: 48497-49247 bp Feature: domain Description: HK_WalK Location: 48497-49247 bp Feature: domain Description: PRK11360 Location: 49274-49916 bp Feature: domain Description: PRK113 60 Location: 49274-49916 bp Feature: gene Location: 49908-50600 bp Feature: domain Description: OmpR Location: 49917-50580 bp Feature: domain Description: OmpR Location: 49917-50580 bp Feature: gene Location: 50740-52011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50995-51658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50995-51658 bp Feature: domain Description: GIIM Note: maturase Location: 51736-51919 bp Feature: domain Description: GIIM Note: maturase Location: 5173 6-51919 bp Feature: gene Location: 53044-53433 bp Feature: gene Location: 53657-54043 bp Feature: domain Description: Rep_1 Location: 53663-53969 bp Feature: domain Description: Rep_1 Location: 53 663 -53 969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HK_WalK (NF033092), PRK11360 (two-component system sensor histidine kinase AtoS), OmpR (COG0745), RVT-GII, GIIM (pfam08388), Rep_1 (pfam01446)