myRT

myRT report for GCA_001897795.1_ASM189779v1

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Seq: MKUL01000057.1 Alphaproteobacteria bacterium 41-28 SCNpilot_cont_1000_p_scaffold_664, whole genome shotgun sequence (61131 bp)
Overview 1 RT 1: 23038-30475 bp Neighborhood of RT #1 [23038, 30507] TraA_Ti Toprim_3 RVT_N RVT-GII InsE PHA02517 Feature: gene Location: 23038-27441 bp Feature: domain Description: TraA_Ti Location: 23041-25246 bp Feature: domain Description: TraA_Ti Location: 23041 -25246 bp Feature: domain Description: Toprim_3 Location: 26206-26488 bp Feature: domain Description: Toprim_3 Location: 26206-26488 bp Feature: gene Location: 28002-28190 bp Feature: gene Location: 28298-29257 bp Feature: RT Description: RVT_N Location: 28355-28598 bp Feature: RT Description: RVT_N Location: 28355-28598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28643-29255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28643-29255 bp Feature: gene Location: 29333-29632 bp Feature: domain Description: InsE Location: 29336-29600 bp Feature: domain Description: InsE Location: 29336-29600 bp Feature: gene Location: 29629-30507 bp Feature: domain Description: PHA02517 Location: 29680-30475 bp Feature: domain Description: PHA0251 7 Location: 29680-30475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraA_Ti (TIGR02768), Toprim_3 (pfam13362), RVT_N (pfam13655), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)

Seq: MKUL01000009.1 Alphaproteobacteria bacterium 41-28 SCNpilot_cont_1000_p_scaffold_1345, whole genome shotgun sequence (43344 bp)
Overview 1 RT 1: 1653-8011 bp Neighborhood of RT #1 [1653, 8055] Tnp_DNA_bind rve_3 RVT-GII GIIM F-box-like DUF1015 Feature: gene Location: 1653-1949 bp Feature: domain Description: Tnp_DNA_bind Location: 1692-1800 bp Feature: domain Description: Tnp_DNA_bind Location: 1692 -1800 bp Feature: gene Location: 2021-2296 bp Feature: domain Description: rve_3 Location: 2165-2267 bp Feature: domain Description: rve_3 Location: 2 165-2 2 67 bp Feature: gene Location: 2756-4060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3041-3680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3041-3680 bp Feature: domain Description: GIIM Note: maturase Location: 3755-3971 bp Feature: domain Description: GIIM Note: maturase Location: 3755-3971 bp Feature: gene Location: 4646-6448 bp Feature: domain Description: F-box-like Location: 4808-4931 bp Feature: domain Description: F-box-like Location: 4808-4931 bp Feature: gene Location: 6988-8055 bp Feature: domain Description: DUF1015 Location: 7093-8011 bp Feature: domain Description: DUF1015 Location: 7093-8011 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tnp_DNA_bind (pfam14706), rve_3 (pfam13683), RVT-GII, GIIM (pfam08388), F-box-like (pfam12937), DUF1015 (pfam06245)