myRT

myRT report for GCA_001898225.1_ASM189822v1

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Seq: MKTJ01000032.1 Chloroflexi bacterium 54-19 SCNpilot_cont_500_bf_scaffold_234, whole genome shotgun sequence (149100 bp)
Overview 1 RT 1: 117630-125775 bp Neighborhood of RT #1 [117630, 125775] YhcG YhcG_C RVT_N RVT-GII GIIM HNH COG3666 DDE_Tnp_1_6 Feature: gene Location: 117630-118697 bp Feature: gene Location: 119390-120412 bp Feature: domain Description: YhcG Location: 119447-119714 bp Feature: domain Description: YhcG Location: 1 1 9447-1 1 971 4 bp Feature: domain Description: YhcG_C Location: 119906-120353 bp Feature: domain Description: YhcG_C Location: 1 1 9906-1 20353 bp Feature: gene Location: 120752-122503 bp Feature: RT Description: RVT_N Location: 120830-121070 bp Feature: RT Description: RVT_N Location: 1 20830-1 21 070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121118-121760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 1 1 8-1 21 760 bp Feature: domain Description: GIIM Note: maturase Location: 121814-122045 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 81 4-1 22045 bp Feature: domain Description: HNH Note: nucleases Location: 122297-122435 bp Feature: domain Description: HNH Note: nucleases Location: 1 22297-1 22435 bp Feature: gene Location: 122944-124641 bp Feature: domain Description: COG3666 Location: 122956-123421 bp Feature: domain Description: COG3666 Location: 1 22956-1 23421 bp Feature: domain Description: DDE_Tnp_1_6 Location: 124165-124531 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 241 65-1 24531 bp Feature: gene Location: 125401-125775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhcG (COG4804), YhcG_C, RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751)

Seq: MKTJ01000056.1 Chloroflexi bacterium 54-19 SCNpilot_cont_500_bf_scaffold_363, whole genome shotgun sequence (67868 bp)
Overview 1 RT 1: 31288-41668 bp Neighborhood of RT #1 [31288, 41679] MDR1 Germane RVT-GII Intron_maturas2 HNHc parB_part PurR PRK11107 PRK11107 YesN Feature: gene Location: 31288-32301 bp Feature: domain Description: MDR1 Location: 31300-32272 bp Feature: domain Description: MDR1 Location: 31300-32 2 72 bp Feature: gene Location: 32449-33837 bp Feature: domain Description: Germane Location: 33442-33817 bp Feature: domain Description: Germane Location: 33442 -33817 bp Feature: gene Location: 34205-36037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34469-35273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34469-352 73 bp Feature: domain Description: Intron_maturas2 Location: 35411-35639 bp Feature: domain Description: Intron_maturas2 Location: 35411-35639 bp Feature: domain Description: HNHc Note: nucleases Location: 35825-35978 bp Feature: domain Description: HNHc Note: nucleases Location: 3582 5-35978 bp Feature: gene Location: 36990-37739 bp Feature: domain Description: parB_part Location: 37020-37422 bp Feature: domain Description: parB_part Location: 3702 0-3742 2 bp Feature: gene Location: 38329-41679 bp Feature: domain Description: PurR Location: 38368-38968 bp Feature: domain Description: PurR Location: 38368-38968 bp Feature: domain Description: PRK11107 Location: 39847-40684 bp Feature: domain Description: PRK11107 Location: 39847-40684 bp Feature: domain Description: PRK11107 Location: 40966-41278 bp Feature: domain Description: PRK11107 Location: 40966-412 78 bp Feature: domain Description: YesN Location: 41302-41668 bp Feature: domain Description: YesN Location: 41302 -41668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MDR1 (cd08267), Germane (smart00909), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), parB_part (TIGR00180), PurR (COG1609), PRK11107 (hybrid sensory histidine kinase BarA; Provisional), YesN (COG4753)