myRT

myRT report for GCA_001898555.1_ASM189855v1

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Seq: MKUC01000034.1 Sphingopyxis sp. 65-8 SCNpilot_expt_500_bf_scaffold_1977, whole genome shotgun sequence (19012 bp)
Overview 1 RT 1: 9100-15180 bp Neighborhood of RT #1 [9100, 15239] HTH_ARSR DUF2958 RVT-GII GIIM Spo0J COG4957 Feature: gene Location: 9100-9429 bp Feature: domain Description: HTH_ARSR Location: 9130-9322 bp Feature: domain Description: HTH_ARSR Location: 91 30-9322 bp Feature: gene Location: 10048-10491 bp Feature: domain Description: DUF2958 Location: 10087-10429 bp Feature: domain Description: DUF2958 Location: 1 0087-1 0429 bp Feature: gene Location: 10704-12275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11055-11772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 055-1 1 772 bp Feature: domain Description: GIIM Note: maturase Location: 11847-12075 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 847-1 2075 bp Feature: gene Location: 12857-14614 bp Feature: domain Description: Spo0J Location: 12926-13451 bp Feature: domain Description: Spo0J Location: 1 2926-1 3451 bp Feature: gene Location: 14778-15239 bp Feature: domain Description: COG4957 Location: 14787-15180 bp Feature: domain Description: COG4957 Location: 1 4787-1 51 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2958 (pfam11171), RVT-GII, GIIM (pfam08388), Spo0J (COG1475), COG4957 (Predicted transcriptional regulator )