myRT

myRT report for GCA_001898705.1_ASM189870v1

Download annotations/find similar RTs

Seq: MKUU01000017.1 Caedibacter sp. 38-128 SCNpilot_expt_500_p_scaffold_2301, whole genome shotgun sequence (15288 bp)
Overview 1 RT 1: 1783-8427 bp Neighborhood of RT #1 [1783, 8427] TraD RVT-GII GIIM TraA_Ti TraA_Ti Feature: gene Location: 1783-2115 bp Feature: domain Description: TraD Location: 1855-2077 bp Feature: domain Description: TraD Location: 1 855-2077 bp Feature: gene Location: 2120-2473 bp Feature: gene Location: 3094-4413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3349-4039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3349-4039 bp Feature: domain Description: GIIM Note: maturase Location: 4111-4315 bp Feature: domain Description: GIIM Note: maturase Location: 41 1 1 -431 5 bp Feature: gene Location: 4543-8100 bp Feature: domain Description: TraA_Ti Location: 4570-6310 bp Feature: domain Description: TraA_Ti Location: 4570-631 0 bp Feature: domain Description: TraA_Ti Location: 6679-7333 bp Feature: domain Description: TraA_Ti Location: 6679-7333 bp Feature: gene Location: 8239-8427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), RVT-GII, GIIM (pfam08388), TraA_Ti (TIGR02768)

Seq: MKUU01000042.1 Caedibacter sp. 38-128 SCNpilot_expt_500_p_scaffold_571, whole genome shotgun sequence (41472 bp)
Overview 1 RT 1: 3344-8653 bp Neighborhood of RT #1 [3344, 8670] LysR SagB_rel_DH_2 RVT-GII GIIM HTH_37 Gp49 Feature: gene Location: 3344-4231 bp Feature: domain Description: LysR Location: 3350-4223 bp Feature: domain Description: LysR Location: 3350-42 2 3 bp Feature: gene Location: 4373-5470 bp Feature: domain Description: SagB_rel_DH_2 Location: 4532-5435 bp Feature: domain Description: SagB_rel_DH_2 Location: 4532 -5435 bp Feature: gene Location: 5869-7119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6073-6730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6073-6730 bp Feature: domain Description: GIIM Note: maturase Location: 6811-7021 bp Feature: domain Description: GIIM Note: maturase Location: 6811-702 1 bp Feature: gene Location: 8037-8336 bp Feature: domain Description: HTH_37 Location: 8106-8316 bp Feature: domain Description: HTH_37 Location: 8106-8316 bp Feature: gene Location: 8329-8670 bp Feature: domain Description: Gp49 Location: 8389-8653 bp Feature: domain Description: Gp49 Location: 8389-8653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), SagB_rel_DH_2 (TIGR04511), RVT-GII, GIIM (pfam08388), HTH_37 (pfam13744), Gp49 (pfam05973)