myRT

myRT report for GCA_001899625.1_ASM189962v1

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Seq: MQME01000037.1 Escherichia coli strain C153 NODE_37_length_55047_cov_5.06158, whole genome shotgun sequence (55047 bp)
Overview 1 RT 1: 29732-33615 bp Neighborhood of RT #1 [29732, 33620] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 29732-30448 bp Ori: OJZ31124.1 Feature: domain Description: rph Location: 29735-30443 bp Feature: domain Description: rph Location: 29735-30443 bp Feature: gene Location: 30515-31156 bp Ori: OJZ31125.1 Feature: domain Description: pyrE Location: 30518-31151 bp Feature: domain Description: pyrE Location: 3051 8-31 1 51 bp Feature: gene Location: 31454-32413 bp Ori: OJZ31126.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31589-32138 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 589-321 38 bp Feature: gene Location: 32459-33055 bp Ori: OJZ31127.1 Feature: domain Description: slmA Location: 32465-33041 bp Feature: domain Description: slmA Location: 32465-33041 bp Feature: gene Location: 33162-33620 bp Ori: OJZ31128.1 Feature: domain Description: dut Location: 33168-33615 bp Feature: domain Description: dut Location: 331 68-3361 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: MQME01000066.1 Escherichia coli strain C153 NODE_66_length_19974_cov_5.1435, whole genome shotgun sequence (19974 bp)
Overview 1 RT 1: 1-3900 bp Neighborhood of RT #1 [1, 3905] RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 1-1097 bp Feature: gene Location: 1535-2905 bp Ori: OJZ26150.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1763-2369 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1763-2 369 bp Feature: gene Location: 2883-3434 bp Ori: OJZ26151.1 Feature: domain Description: SLATT_5 Location: 2889-3405 bp Feature: domain Description: SLATT_5 Location: 2 889-3405 bp Feature: gene Location: 3657-3905 bp Ori: OJZ26152.1 Feature: domain Description: PRK10597 Location: 3660-3900 bp Feature: domain Description: PRK10597 Location: 3660-3900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)