myRT

myRT report for GCA_001901205.1_ASM190120v1

Download annotations/find similar RTs

Seq: MRBR01000115.1 Mycobacterium chimaera strain Fl-0169 SOAP_6249_len_New_1:5498, whole genome shotgun sequence (5498 bp)
Overview 1 RT 1: 1-5147 bp Neighborhood of RT #1 [1, 5147] Transposase_mut RVT_N RVT-GII GIIM DEDD_Tnp_IS110 Transposase_20 Feature: gene Location: 1-486 bp Feature: domain Description: Transposase_mut Location: 73-484 bp Feature: domain Description: Transposase_mut Location: 73-484 bp Feature: gene Location: 753-2555 bp Feature: domain Description: RVT_N Location: 798-1035 bp Feature: domain Description: RVT_N Location: 798-1 035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1095-1755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 095-1 755 bp Feature: domain Description: GIIM Note: maturase Location: 1824-2055 bp Feature: domain Description: GIIM Note: maturase Location: 1 824-2055 bp Feature: gene Location: 3253-4497 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 3271-3742 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 3271 -3742 bp Feature: domain Description: Transposase_20 Location: 4084-4336 bp Feature: domain Description: Transposase_20 Location: 4084-4336 bp Feature: gene Location: 4824-5147 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371)

Seq: MRBR01000222.1 Mycobacterium chimaera strain Fl-0169 SOAP_6380_len:7378, whole genome shotgun sequence (7378 bp)
Overview 1 RT 1: 3198-6690 bp Neighborhood of RT #1 [3198, 6728] RVT-GII GIIM rve TetR_N TetR_C_35 Feature: gene Location: 3198-3413 bp Feature: gene Location: 3782-3940 bp Feature: gene Location: 3943-5391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4261-4948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 61-4948 bp Feature: domain Description: GIIM Note: maturase Location: 5023-5218 bp Feature: domain Description: GIIM Note: maturase Location: 502 3-52 18 bp Feature: gene Location: 5526-5807 bp Feature: domain Description: rve Location: 5532-5652 bp Feature: domain Description: rve Location: 5532 -5652 bp Feature: gene Location: 6099-6728 bp Feature: domain Description: TetR_N Location: 6156-6288 bp Feature: domain Description: TetR_N Location: 6156-62 88 bp Feature: domain Description: TetR_C_35 Location: 6357-6690 bp Feature: domain Description: TetR_C_35 Location: 6357-6690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), rve (pfam00665), TetR_N (pfam00440), TetR_C_35 (pfam18556)

Seq: MRBR01000250.1 Mycobacterium chimaera strain Fl-0169 Velvet_106_len:16047, whole genome shotgun sequence (16047 bp)
Overview 1 RT 1: 3172-9175 bp Neighborhood of RT #1 [3172, 9186] RVT-GII GIIM NuoN NuoM Feature: gene Location: 3172-3447 bp Feature: gene Location: 3468-3719 bp Feature: gene Location: 3747-5219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4089-4785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4089-4785 bp Feature: domain Description: GIIM Note: maturase Location: 4854-5067 bp Feature: domain Description: GIIM Note: maturase Location: 4854-5067 bp Feature: gene Location: 6274-7692 bp Feature: domain Description: NuoN Location: 6307-7678 bp Feature: domain Description: NuoN Location: 63 07-7678 bp Feature: gene Location: 7696-9186 bp Feature: domain Description: NuoM Location: 7699-9175 bp Feature: domain Description: NuoM Location: 7699-9175 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), NuoN (COG1007), NuoM (COG1008)