myRT

myRT report for GCA_001901245.1_ASM190124v1

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Seq: MPOM01000022.1 Bacillus cereus strain NZAS02 NZAS02_mira_c22, whole genome shotgun sequence (116848 bp)
Overview 1 RT 1: 1-3690 bp 2 RT 2: 19099-27051 bp 3 RT 3: 35124-41808 bp Neighborhood of RT #1 [1, 3785] RVT-GII TraC-F-type AAA_10 TcpE Neighborhood of RT #2 [19099, 27782] xerC TraG-D_C RVT-GII Intron_maturas2 HNHc Replic_Relax Neighborhood of RT #3 [35124, 41816] HTH_XRE RVT-GII GIIM HNHc DUF3854 PCYCGC Feature: gene Location: 1-1070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-1006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301 -1 006 bp Feature: gene Location: 1807-3321 bp Feature: domain Description: TraC-F-type Location: 2497-2995 bp Feature: domain Description: TraC-F-type Location: 2497-2995 bp Feature: domain Description: AAA_10 Location: 3148-3322 bp Feature: domain Description: AAA_1 0 Location: 31 48-3322 bp Feature: gene Location: 3381-3785 bp Feature: domain Description: TcpE Location: 3417-3690 bp Feature: domain Description: TcpE Location: 341 7-3690 bp Feature: gene Location: 19099-20073 bp Feature: domain Description: xerC Location: 19126-19975 bp Feature: domain Description: xerC Location: 1 91 26-1 9975 bp Feature: gene Location: 20640-22040 bp Feature: domain Description: TraG-D_C Location: 20787-21150 bp Feature: domain Description: TraG-D_C Location: 20787-21 1 50 bp Feature: gene Location: 22141-23958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22405-23236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22405-23236 bp Feature: domain Description: Intron_maturas2 Location: 23314-23608 bp Feature: domain Description: Intron_maturas2 Location: 2331 4-23608 bp Feature: domain Description: HNHc Note: nucleases Location: 23755-23932 bp Feature: domain Description: HNHc Note: nucleases Location: 23755-23932 bp Feature: gene Location: 24575-26260 bp Feature: gene Location: 26232-27782 bp Feature: domain Description: Replic_Relax Location: 26328-27051 bp Feature: domain Description: Replic_Relax Location: 26328-27051 bp Feature: gene Location: 35124-35366 bp Feature: domain Description: HTH_XRE Location: 35193-35331 bp Feature: domain Description: HTH_XRE Location: 351 93-35331 bp Feature: gene Location: 35368-36918 bp Feature: gene Location: 37978-39801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38272-38971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38272-38971 bp Feature: domain Description: GIIM Note: maturase Location: 39055-39298 bp Feature: domain Description: GIIM Note: maturase Location: 39055-39298 bp Feature: domain Description: HNHc Note: nucleases Location: 39544-39682 bp Feature: domain Description: HNHc Note: nucleases Location: 39544-39682 bp Feature: gene Location: 39836-41077 bp Feature: domain Description: DUF3854 Location: 40724-41045 bp Feature: domain Description: DUF3854 Location: 40724-41 045 bp Feature: gene Location: 41298-41816 bp Feature: domain Description: PCYCGC Location: 41373-41808 bp Feature: domain Description: PCYCGC Location: 41 373-41 808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TraC-F-type (TIGR02746), AAA_10 (pfam12846), TcpE (pfam12648), xerC (PRK01287), TraG-D_C (pfam12696), Intron_maturas2 (pfam01348), HNHc (smart00507), Replic_Relax (pfam13814), HTH_XRE (smart00530)
GIIM (pfam08388), DUF3854 (pfam12965), PCYCGC (pfam13798)

Seq: MPOM01000004.1 Bacillus cereus strain NZAS02 NZAS02_mira_c4, whole genome shotgun sequence (537563 bp)
Overview 1 RT 1: 174770-183438 bp Neighborhood of RT #1 [174770, 183455] spore_sigI RVT-GII GIIM RVT-GII LdcB Feature: gene Location: 174770-175492 bp Feature: domain Description: spore_sigI Location: 174824-175469 bp Feature: domain Description: spore_sigI Location: 17482 4-175469 bp Feature: gene Location: 176267-176545 bp Feature: gene Location: 176817-178118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177126-177756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17712 6-177756 bp Feature: domain Description: GIIM Note: maturase Location: 177837-178065 bp Feature: domain Description: GIIM Note: maturase Location: 177837-178065 bp Feature: gene Location: 178473-178664 bp Feature: gene Location: 179062-180208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 179359-179953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 179359-179953 bp Feature: gene Location: 181016-181312 bp Feature: gene Location: 182712-183455 bp Feature: domain Description: LdcB Location: 182811-183438 bp Feature: domain Description: LdcB Location: 182 811-183438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT spore_sigI (TIGR02895), RVT-GII, GIIM (pfam08388), LdcB (COG1876)

Seq: MPOM01000053.1 Bacillus cereus strain NZAS02 NZAS02_mira_c60, whole genome shotgun sequence (1813 bp)
Overview 1 RT 1: 1-1006 bp Neighborhood of RT #1 [1, 1244] RVT-GII Feature: gene Location: 1-1244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-1006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 01-1006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MPOM01000025.1 Bacillus cereus strain NZAS02 NZAS02_mira_c25, whole genome shotgun sequence (33337 bp)
Overview 1 RT 1: 3-5927 bp Neighborhood of RT #1 [3, 5927] PRTRC_A E1_enzyme_family RVT-GII HNHc Feature: gene Location: 3-998 bp Feature: domain Description: PRTRC_A Location: 537-891 bp Feature: domain Description: PRTRC_A Location: 537-891 bp Feature: gene Location: 1073-1396 bp Feature: domain Description: E1_enzyme_family Location: 1136-1379 bp Feature: domain Description: E1_enzyme_family Location: 1136-1379 bp Feature: gene Location: 2114-3976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2426-3155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 26-3155 bp Feature: domain Description: HNHc Note: nucleases Location: 3713-3863 bp Feature: domain Description: HNHc Note: nucleases Location: 3713-3863 bp Feature: gene Location: 4064-4567 bp Feature: gene Location: 4950-5927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT E1_enzyme_family (cl22428), RVT-GII, HNHc (smart00507), PRTRC_A (TIGR03735)

Seq: MPOM01000074.1 Bacillus cereus strain NZAS02 NZAS02_mira_rep_c97, whole genome shotgun sequence (1549 bp)
Overview 1 RT 1: 1-784 bp Neighborhood of RT #1 [1, 820] RVT_N RVT-GII Feature: gene Location: 1-820 bp Feature: RT Description: RVT_N Location: 43-280 bp Feature: RT Description: RVT_N Location: 43-280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII