myRT

myRT report for GCA_001901735.1_ASM190173v1

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Seq: LYPQ01000004.1 Klebsiella pneumoniae strain YMC2011/8/B10311 IonXpress_005_rawlib.basecaller_c12, whole genome shotgun sequence (88081 bp)
Overview 1 RT 1: 50276-55252 bp Neighborhood of RT #1 [50276, 55257] PRK09692 PRK09692 SLATT_5 RVT-UG17 Psu PRK00872 Feature: gene Location: 50276-51249 bp Feature: domain Description: PRK09692 Location: 50285-50648 bp Feature: domain Description: PRK09692 Location: 50285-50648 bp Feature: domain Description: PRK09692 Location: 50669-51041 bp Feature: domain Description: PRK09692 Location: 50669-51 041 bp Feature: gene Location: 51302-51944 bp Feature: domain Description: SLATT_5 Location: 51305-51716 bp Feature: domain Description: SLATT_5 Location: 51 305-51 71 6 bp Feature: gene Location: 52139-52912 bp Ori: OKB40183.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 52142-52352 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 521 42-52352 bp Feature: gene Location: 53879-54428 bp Feature: domain Description: Psu Location: 53897-54278 bp Feature: domain Description: Psu Location: 53897-54278 bp Feature: gene Location: 54790-55257 bp Ori: OKB40148.1 Feature: domain Description: PRK00872 Location: 54796-55252 bp Feature: domain Description: PRK00872 Location: 54796-55252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455), PRK00872 (hypothetical protein; Provisional)

Seq: LYPQ01000047.1 Klebsiella pneumoniae strain YMC2011/8/B10311 IonXpress_005_rawlib.basecaller_c51, whole genome shotgun sequence (26871 bp)
Overview 1 RT 1: 9891-14907 bp Neighborhood of RT #1 [9891, 14909] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 9891-11162 bp Ori: OKB31010.1 Feature: domain Description: umuC Location: 9894-11157 bp Feature: domain Description: umuC Location: 9894-11157 bp Feature: gene Location: 11162-11587 bp Ori: OKB31011.1 Feature: domain Description: PRK10276 Location: 11165-11573 bp Feature: domain Description: PRK102 76 Location: 11165-11573 bp Feature: gene Location: 11992-13500 bp Ori: OKB31012.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12394-13108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 394-13108 bp Feature: gene Location: 13734-13964 bp Feature: gene Location: 14484-14909 bp Ori: OKB31013.1 Feature: domain Description: Antirestrict Location: 14619-14907 bp Feature: domain Description: Antirestrict Location: 14619-14907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: LYPQ01000063.1 Klebsiella pneumoniae strain YMC2011/8/B10311 IonXpress_005_rawlib.basecaller_c66, whole genome shotgun sequence (3756 bp)
Overview 1 RT 1: 1-3657 bp Neighborhood of RT #1 [1, 3657] DDE_Tnp_Tn3 RVT-GII Feature: gene Location: 1-194 bp Feature: gene Location: 249-1730 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 483-1650 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 483 -1650 bp Feature: gene Location: 1755-2896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2013-2286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2013 -2286 bp Feature: gene Location: 3496-3657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_Tn3 (pfam01526), RVT-GII