myRT

myRT report for GCA_001901745.1_ASM190174v1

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Seq: LYPV01000112.1 Klebsiella pneumoniae strain YMC2010/8/B2027 IonXpress_007_rawlib.basecaller_rep_c112, whole genome shotgun sequence (3565 bp)
Overview 1 RT 1: 938-3190 bp Neighborhood of RT #1 [938, 3565] DDE_Tnp_ISL3 RVT-GII Feature: gene Location: 938-1690 bp Ori: OKB49273.1 Feature: domain Description: DDE_Tnp_ISL3 Location: 944-1649 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 944-1 649 bp Feature: gene Location: 2098-3565 bp Ori: OKB49274.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2500-3190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2500-31 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISL3 (pfam01610), RVT-GII

Seq: LYPV01000055.1 Klebsiella pneumoniae strain YMC2010/8/B2027 IonXpress_007_rawlib.basecaller_c53, whole genome shotgun sequence (28847 bp)
Overview 1 RT 1: 1-4003 bp Neighborhood of RT #1 [1, 4005] RVT-GII dacD SbcB Feature: gene Location: 1-717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-718 bp Feature: gene Location: 1237-2400 bp Ori: OKB54810.1 Feature: domain Description: dacD Location: 1240-2395 bp Feature: domain Description: dacD Location: 12 40-2 395 bp Feature: gene Location: 2581-4005 bp Ori: OKB54794.1 Feature: domain Description: SbcB Location: 2587-4003 bp Feature: domain Description: SbcB Location: 2 587-4003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: LYPV01000080.1 Klebsiella pneumoniae strain YMC2010/8/B2027 IonXpress_007_rawlib.basecaller_c76, whole genome shotgun sequence (6923 bp)
Overview 1 RT 1: 4988-6913 bp Neighborhood of RT #1 [4988, 6923] Acetyltransf_10 TisB_tox RVT-GII Feature: gene Location: 4988-5434 bp Ori: OKB52608.1 Feature: domain Description: Acetyltransf_10 Location: 5105-5405 bp Feature: domain Description: Acetyltransf_10 Location: 5105-5405 bp Feature: gene Location: 5525-5614 bp Ori: OKB52609.1 Feature: domain Description: TisB_tox Location: 5528-5612 bp Feature: domain Description: TisB_tox Location: 5528-5612 bp Feature: gene Location: 6340-6923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6742-6913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6742-6913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_10 (pfam13673), TisB_tox (TIGR04459), RVT-GII

Seq: LYPV01000115.1 Klebsiella pneumoniae strain YMC2010/8/B2027 IonXpress_007_rawlib.basecaller_rep_c115, whole genome shotgun sequence (1805 bp)
Overview 1 RT 1: 214-1477 bp Neighborhood of RT #1 [214, 1722] RVT-GII GIIM Feature: gene Location: 214-1722 bp Ori: OKB49056.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 472-1204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 72-1204 bp Feature: domain Description: GIIM Note: maturase Location: 1279-1477 bp Feature: domain Description: GIIM Note: maturase Location: 1279-14 77 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LYPV01000070.1 Klebsiella pneumoniae strain YMC2010/8/B2027 IonXpress_007_rawlib.basecaller_c67, whole genome shotgun sequence (21010 bp)
Overview 1 RT 1: 1-2678 bp Neighborhood of RT #1 [1, 2815] RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 1-921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25-529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 -5 29 bp Feature: gene Location: 1170-2141 bp Ori: OKB53384.1 Feature: domain Description: StbA Location: 1173-2118 bp Feature: domain Description: StbA Location: 1173-2118 bp Feature: gene Location: 2144-2815 bp Ori: OKB53385.1 Feature: domain Description: Plasmid_stab_B Location: 2159-2366 bp Feature: domain Description: Plasmid_stab_B Location: 215 9-2366 bp Feature: domain Description: Plasmid_stab_B Location: 2471-2678 bp Feature: domain Description: Plasmid_stab_B Location: 2471-2678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: LYPV01000001.1 Klebsiella pneumoniae strain YMC2010/8/B2027 IonXpress_007_rawlib.basecaller_c1, whole genome shotgun sequence (92765 bp)
Overview 1 RT 1: 66483-73065 bp 2 RT 2: 90163-92766 bp Neighborhood of RT #1 [66483, 73079] PRK08178 PRK08155 RVT-GII DDE_Tnp_IS1 IS5 Neighborhood of RT #2 [90163, 92765] InsE Tra5 RVT-GII GIIM Feature: gene Location: 66483-66770 bp Ori: OKB61906.1 Feature: domain Description: PRK08178 Location: 66489-66768 bp Feature: domain Description: PRK08178 Location: 6 6 489-6 6 76 8 bp Feature: gene Location: 66774-68462 bp Ori: OKB61907.1 Feature: domain Description: PRK08155 Location: 66777-68460 bp Feature: domain Description: PRK08155 Location: 6 6 777-6 846 0 bp Feature: gene Location: 69024-70508 bp Ori: OKB61908.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69426-70116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 9426 -70116 bp Feature: gene Location: 71374-71877 bp Ori: OKB61909.1 Feature: domain Description: DDE_Tnp_IS1 Location: 71485-71875 bp Feature: domain Description: DDE_Tnp_IS1 Location: 71485-71875 bp Feature: gene Location: 72099-73079 bp Feature: domain Description: IS5 Location: 72288-73065 bp Feature: domain Description: IS5 Location: 72288-7306 5 bp Feature: gene Location: 90163-90462 bp Ori: OKB61916.1 Feature: domain Description: InsE Location: 90190-90457 bp Feature: domain Description: InsE Location: 90190-90457 bp Feature: gene Location: 90459-90926 bp Ori: OKB61917.1 Feature: domain Description: Tra5 Location: 90582-90861 bp Feature: domain Description: Tra5 Location: 90582-9086 1 bp Feature: gene Location: 91533-92765 bp Ori: OKB61922.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91791-92523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91791-92523 bp Feature: domain Description: GIIM Note: maturase Location: 92598-92766 bp Feature: domain Description: GIIM Note: maturase Location: 92598-9276 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08178 (acetolactate synthase 1 small subunit), PRK08155 (acetolactate synthase large subunit), RVT-GII, DDE_Tnp_IS1 (pfam03400), IS5 (COG3039), InsE (COG2963), Tra5 (COG2801), GIIM (pfam08388)