myRT

myRT report for GCA_001901755.1_ASM190175v1

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Seq: LYPU01000020.1 Klebsiella pneumoniae strain YMC2011/7/B7207 IonXpress_006_rawlib.basecaller_c27, whole genome shotgun sequence (55148 bp)
Overview 1 RT 1: 18004-22625 bp Neighborhood of RT #1 [18004, 22945] PinE PRK10597 RVT-Retrons ParAB_family Feature: gene Location: 18004-18582 bp Ori: OKB48466.1 Feature: domain Description: PinE Location: 18007-18553 bp Feature: domain Description: PinE Location: 1 8007-1 8553 bp Feature: gene Location: 19464-19712 bp Ori: OKB48433.1 Feature: domain Description: PRK10597 Location: 19467-19707 bp Feature: domain Description: PRK1 0597 Location: 1 9467-1 9707 bp Feature: gene Location: 20096-21054 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20270-20657 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20270-20657 bp Feature: gene Location: 21085-21276 bp Feature: gene Location: 21869-22945 bp Ori: OKB48435.1 Feature: domain Description: ParAB_family Location: 21881-22625 bp Feature: domain Description: ParAB_family Location: 21 881 -22625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons, ParAB_family (cd02042)

Seq: LYPU01000013.1 Klebsiella pneumoniae strain YMC2011/7/B7207 IonXpress_006_rawlib.basecaller_c20, whole genome shotgun sequence (169987 bp)
Overview 1 RT 1: 122006-131923 bp Neighborhood of RT #1 [122006, 132126] TIGR02687 YeeA RVT-UG5 YeeA Feature: gene Location: 122006-124609 bp Ori: OKB49456.1 Feature: domain Description: TIGR02687 Location: 122024-124577 bp Feature: domain Description: TIGR02 687 Location: 12 2 02 4-12 4577 bp Feature: gene Location: 124828-126441 bp Ori: OKB49457.1 Feature: domain Description: YeeA Location: 125353-126373 bp Feature: domain Description: YeeA Location: 12 5353-12 6373 bp Feature: gene Location: 126612-129633 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 127074-127560 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 12 7074-12 7560 bp Feature: gene Location: 129664-130119 bp Feature: gene Location: 130153-132126 bp Ori: OKB49413.1 Feature: domain Description: YeeA Location: 130795-131923 bp Feature: domain Description: YeeA Location: 130795-13192 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02687 (TIGR02687 family protein), YeeA (COG1002), RVT-UG5