myRT

myRT report for GCA_001901815.1_ASM190181v1

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Seq: MIFF01000011.1 Bacillus cereus strain MOD1_Bc67 Bc67_contig_11, whole genome shotgun sequence (47808 bp)
Overview 1 RT 1: 9861-18597 bp 2 RT 2: 22149-28311 bp Neighborhood of RT #1 [9861, 18674] TrbL TraC-F-type RVT-GII HNHc TraC-F-type Neighborhood of RT #2 [22149, 28367] DUF3854 RVT-GII HNHc LPD1 Feature: gene Location: 9861-13865 bp Feature: domain Description: TrbL Location: 10347-10623 bp Feature: domain Description: TrbL Location: 1 0347-1 0623 bp Feature: gene Location: 13896-14855 bp Feature: domain Description: TraC-F-type Location: 13914-14694 bp Feature: domain Description: TraC-F-type Location: 1 391 4-1 4694 bp Feature: gene Location: 15155-16987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15455-16160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5455-1 61 60 bp Feature: domain Description: HNHc Note: nucleases Location: 16739-16871 bp Feature: domain Description: HNHc Note: nucleases Location: 1 6739-1 6871 bp Feature: gene Location: 17380-17556 bp Feature: gene Location: 17703-18674 bp Feature: domain Description: TraC-F-type Location: 18123-18597 bp Feature: domain Description: TraC-F-type Location: 1 81 23-1 8597 bp Feature: gene Location: 22149-22319 bp Feature: gene Location: 22446-23369 bp Feature: domain Description: DUF3854 Location: 23010-23340 bp Feature: domain Description: DUF3854 Location: 2301 0-23340 bp Feature: gene Location: 23453-25336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23774-24512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23774-2451 2 bp Feature: domain Description: HNHc Note: nucleases Location: 25070-25217 bp Feature: domain Description: HNHc Note: nucleases Location: 25070-2521 7 bp Feature: gene Location: 26072-26602 bp Feature: gene Location: 26592-28367 bp Feature: domain Description: LPD1 Location: 28116-28311 bp Feature: domain Description: LPD1 Location: 281 1 6-2831 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507), TrbL (pfam04610), DUF3854 (pfam12965), LPD1 (pfam18796)

Seq: MIFF01000036.1 Bacillus cereus strain MOD1_Bc67 Bc67_contig_36, whole genome shotgun sequence (59570 bp)
Overview 1 RT 1: 11530-20466 bp 2 RT 2: 24660-29469 bp 3 RT 3: 33995-38284 bp Neighborhood of RT #1 [11530, 20645] TraG-D_C Ftsk_gamma Ftsk_gamma RVT_N RVT-GII GIIM nuc_hydro rpsA Neighborhood of RT #2 [24660, 29474] COG4712 RVT-GII beta_clamp Neighborhood of RT #3 [33995, 38284] E1_enzyme_family RVT-GII Intron_maturas2 HNHc PRTRC_ThiF Feature: gene Location: 11530-12000 bp Feature: gene Location: 12018-15518 bp Feature: domain Description: TraG-D_C Location: 13635-13995 bp Feature: domain Description: TraG-D_C Location: 13635-13995 bp Feature: domain Description: Ftsk_gamma Location: 14403-14580 bp Feature: domain Description: Ftsk_gamma Location: 14403-14580 bp Feature: domain Description: Ftsk_gamma Location: 14712-14847 bp Feature: domain Description: Ftsk_gamma Location: 14712 -14847 bp Feature: gene Location: 15731-17377 bp Feature: RT Description: RVT_N Location: 15773-16010 bp Feature: RT Description: RVT_N Location: 15773-16010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16064-16724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16064-1672 4 bp Feature: domain Description: GIIM Note: maturase Location: 16793-17024 bp Feature: domain Description: GIIM Note: maturase Location: 16793-1702 4 bp Feature: gene Location: 18097-19068 bp Feature: domain Description: nuc_hydro Location: 18133-19039 bp Feature: domain Description: nuc_hydro Location: 18133-19039 bp Feature: gene Location: 19662-20645 bp Feature: domain Description: rpsA Location: 19929-20466 bp Feature: domain Description: rpsA Location: 1992 9-2 0466 bp Feature: gene Location: 24660-25016 bp Feature: domain Description: COG4712 Location: 24669-25011 bp Feature: domain Description: COG4712 Location: 2 4669-2 5011 bp Feature: gene Location: 25440-25580 bp Feature: gene Location: 25775-27676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26093-26795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6093-2 6795 bp Feature: gene Location: 27754-28281 bp Feature: gene Location: 28362-29474 bp Feature: domain Description: beta_clamp Location: 28365-29469 bp Feature: domain Description: beta_clamp Location: 2 8365-2 9469 bp Feature: gene Location: 33995-34405 bp Feature: gene Location: 34408-34590 bp Feature: domain Description: E1_enzyme_family Location: 34456-34576 bp Feature: domain Description: E1_enzyme_family Location: 34456-34576 bp Feature: gene Location: 35159-37099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35489-36326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35489-3632 6 bp Feature: domain Description: Intron_maturas2 Location: 36464-36755 bp Feature: domain Description: Intron_maturas2 Location: 36464-36755 bp Feature: domain Description: HNHc Note: nucleases Location: 36887-37046 bp Feature: domain Description: HNHc Note: nucleases Location: 36887-37046 bp Feature: gene Location: 37351-37893 bp Feature: domain Description: PRTRC_ThiF Location: 37414-37873 bp Feature: domain Description: PRTRC_ThiF Location: 37414-37873 bp Feature: gene Location: 37913-38284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), nuc_hydro (cl00226), rpsA (TIGR00717), COG4712 (Uncharacterized protein ), beta_clamp (cl29549), E1_enzyme_family (cl22428)
Intron_maturas2 (pfam01348), HNHc (smart00507), PRTRC_ThiF (TIGR03736)

Seq: MIFF01000058.1 Bacillus cereus strain MOD1_Bc67 Bc67_contig_58, whole genome shotgun sequence (27402 bp)
Overview 1 RT 1: 7535-11306 bp Neighborhood of RT #1 [7535, 11306] E1_enzyme_family RVT-GII HNHc Feature: gene Location: 7535-7936 bp Feature: domain Description: E1_enzyme_family Location: 7583-7919 bp Feature: domain Description: E1_enzyme_family Location: 7583 -7919 bp Feature: gene Location: 8230-8364 bp Feature: gene Location: 8636-10516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8966-9695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8966-9695 bp Feature: domain Description: HNHc Note: nucleases Location: 10253-10403 bp Feature: domain Description: HNHc Note: nucleases Location: 10253 -10403 bp Feature: gene Location: 10580-11107 bp Feature: gene Location: 11169-11306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT E1_enzyme_family (cl22428), RVT-GII, HNHc (smart00507)

Seq: MIFF01000006.1 Bacillus cereus strain MOD1_Bc67 Bc67_contig_6, whole genome shotgun sequence (152676 bp)
Overview 1 RT 1: 1037-14498 bp 2 RT 2: 42384-48123 bp 3 RT 3: 68624-71190 bp Neighborhood of RT #1 [1037, 14533] holA LPD1 RVT-GII HNHc RpoD DUF3854 RVT-GII GIIM HNHc RVT-GII HTH_XRE Neighborhood of RT #2 [42384, 48123] AAA_10 RVT-GII HNHc AAA_10 Neighborhood of RT #3 [68624, 71198] group_II_RT_mat RVT-GII Cas9 RadC Feature: gene Location: 1037-2032 bp Feature: domain Description: holA Location: 1043-2003 bp Feature: domain Description: holA Location: 104 3-2003 bp Feature: gene Location: 2058-2726 bp Feature: domain Description: LPD1 Location: 2403-2604 bp Feature: domain Description: LPD1 Location: 24 03-2604 bp Feature: gene Location: 2930-4909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3272-3968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3272-3968 bp Feature: domain Description: HNHc Note: nucleases Location: 4628-4760 bp Feature: domain Description: HNHc Note: nucleases Location: 4 628-4 760 bp Feature: gene Location: 5605-6684 bp Feature: gene Location: 6865-7842 bp Feature: domain Description: RpoD Location: 6961-7783 bp Feature: domain Description: RpoD Location: 6961-7783 bp Feature: gene Location: 7859-8089 bp Feature: gene Location: 8581-9852 bp Feature: domain Description: DUF3854 Location: 9499-9820 bp Feature: domain Description: DUF3854 Location: 94 99-9820 bp Feature: gene Location: 9857-11077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9863-10247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9863-1024 7 bp Feature: domain Description: GIIM Note: maturase Location: 10331-10574 bp Feature: domain Description: GIIM Note: maturase Location: 10331-10574 bp Feature: domain Description: HNHc Note: nucleases Location: 10820-10958 bp Feature: domain Description: HNHc Note: nucleases Location: 10820-10958 bp Feature: gene Location: 11146-11643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11404-11632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114 04 -11632 bp Feature: gene Location: 12739-14298 bp Feature: gene Location: 14291-14533 bp Feature: domain Description: HTH_XRE Location: 14360-14498 bp Feature: domain Description: HTH_XRE Location: 14 360-14 4 98 bp Feature: gene Location: 42384-43919 bp Feature: domain Description: AAA_10 Location: 43725-43902 bp Feature: domain Description: AAA_10 Location: 4 3725-4 3902 bp Feature: gene Location: 44178-44351 bp Feature: gene Location: 44635-46503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44935-45640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 4 935-4 564 0 bp Feature: domain Description: HNHc Note: nucleases Location: 46219-46351 bp Feature: domain Description: HNHc Note: nucleases Location: 4 6219-4 6351 bp Feature: gene Location: 46761-47639 bp Feature: domain Description: AAA_10 Location: 46767-47523 bp Feature: domain Description: AAA_10 Location: 4 6767-4 7523 bp Feature: gene Location: 47641-48123 bp Feature: gene Location: 68624-68803 bp Feature: gene Location: 69022-69297 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 69148-69292 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 6914 8-69292 bp Feature: gene Location: 69310-70335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69319-70060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69319-70060 bp Feature: gene Location: 70351-70905 bp Feature: domain Description: Cas9 Location: 70501-70774 bp Feature: domain Description: Cas9 Location: 70501-70774 bp Feature: gene Location: 70986-71198 bp Feature: domain Description: RadC Location: 71055-71190 bp Feature: domain Description: RadC Location: 71055-71190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT holA (TIGR01128), LPD1 (pfam18796), RVT-GII, HNHc (smart00507), RpoD (COG0568), DUF3854 (pfam12965), GIIM (pfam08388), HTH_XRE (smart00530), AAA_10 (pfam12846), group_II_RT_mat (TIGR04416)
Cas9 (COG3513), RadC (pfam04002)