myRT

myRT report for GCA_001901905.1_ASM190190v1

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Seq: MIFC01000002.1 Bacillus cereus strain MOD1_Bc112 Bc112_contig_2, whole genome shotgun sequence (67714 bp)
Overview 1 RT 1: 17985-30309 bp Neighborhood of RT #1 [17985, 30344] B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat RVT-GII HNHc B_ant_repeat B_ant_repeat B_ant_repeat CcdC Feature: gene Location: 17985-19058 bp Feature: gene Location: 19331-25696 bp Feature: domain Description: B_ant_repeat Location: 19340-19475 bp Feature: domain Description: B_ant_repeat Location: 1 9340-1 9475 bp Feature: domain Description: B_ant_repeat Location: 19715-19868 bp Feature: domain Description: B_ant_repeat Location: 1 971 5-1 9868 bp Feature: domain Description: B_ant_repeat Location: 20105-20258 bp Feature: domain Description: B_ant_repeat Location: 201 05-20258 bp Feature: domain Description: B_ant_repeat Location: 20498-20651 bp Feature: domain Description: B_ant_repeat Location: 20498-20651 bp Feature: domain Description: B_ant_repeat Location: 20894-21050 bp Feature: domain Description: B_ant_repeat Location: 20894-21 050 bp Feature: domain Description: B_ant_repeat Location: 21290-21446 bp Feature: domain Description: B_ant_repeat Location: 21 290-21 446 bp Feature: domain Description: B_ant_repeat Location: 21686-21842 bp Feature: domain Description: B_ant_repeat Location: 21 686-21 842 bp Feature: domain Description: B_ant_repeat Location: 22082-22235 bp Feature: domain Description: B_ant_repeat Location: 22082-22235 bp Feature: domain Description: B_ant_repeat Location: 22478-22634 bp Feature: domain Description: B_ant_repeat Location: 22478-22634 bp Feature: domain Description: B_ant_repeat Location: 22874-23030 bp Feature: domain Description: B_ant_repeat Location: 22874-23030 bp Feature: domain Description: B_ant_repeat Location: 23270-23426 bp Feature: domain Description: B_ant_repeat Location: 23270-23426 bp Feature: domain Description: B_ant_repeat Location: 23666-23819 bp Feature: domain Description: B_ant_repeat Location: 23666-2381 9 bp Feature: domain Description: B_ant_repeat Location: 24062-24215 bp Feature: domain Description: B_ant_repeat Location: 24062-2421 5 bp Feature: domain Description: B_ant_repeat Location: 24458-24614 bp Feature: domain Description: B_ant_repeat Location: 24458-2461 4 bp Feature: domain Description: B_ant_repeat Location: 24854-25010 bp Feature: domain Description: B_ant_repeat Location: 24854-2501 0 bp Feature: domain Description: B_ant_repeat Location: 25250-25406 bp Feature: domain Description: B_ant_repeat Location: 25250-25406 bp Feature: gene Location: 25865-27793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26186-26921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 86-26921 bp Feature: domain Description: HNHc Note: nucleases Location: 27512-27677 bp Feature: domain Description: HNHc Note: nucleases Location: 2751 2-27677 bp Feature: gene Location: 28495-29775 bp Feature: domain Description: B_ant_repeat Location: 28573-28684 bp Feature: domain Description: B_ant_repeat Location: 28573-28684 bp Feature: domain Description: B_ant_repeat Location: 28924-29080 bp Feature: domain Description: B_ant_repeat Location: 28924-29080 bp Feature: domain Description: B_ant_repeat Location: 29323-29479 bp Feature: domain Description: B_ant_repeat Location: 29323-29479 bp Feature: gene Location: 29838-30344 bp Feature: domain Description: CcdC Location: 29847-30309 bp Feature: domain Description: CcdC Location: 29847-30309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT B_ant_repeat (TIGR01451), RVT-GII, HNHc (smart00507), CcdC (COG4846)

Seq: MIFC01000004.1 Bacillus cereus strain MOD1_Bc112 Bc112_contig_4, whole genome shotgun sequence (267383 bp)
Overview 1 RT 1: 254997-260552 bp Neighborhood of RT #1 [254997, 260557] recJ RVT-GII HNHc recJ ssDNA-exonuc_C PRK02304 Feature: gene Location: 254997-255281 bp Feature: domain Description: recJ Location: 255084-255267 bp Feature: domain Description: recJ Location: 2 55084-2 552 67 bp Feature: gene Location: 255394-255552 bp Feature: gene Location: 256034-257827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256292-256997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 562 92 -2 56997 bp Feature: domain Description: HNHc Note: nucleases Location: 257567-257705 bp Feature: domain Description: HNHc Note: nucleases Location: 2 57567-2 57705 bp Feature: gene Location: 257844-259997 bp Feature: domain Description: recJ Location: 257934-259344 bp Feature: domain Description: recJ Location: 2 57934-2 59344 bp Feature: domain Description: ssDNA-exonuc_C Location: 259362-259956 bp Feature: domain Description: ssDNA-exonuc_C Location: 2 59362 -2 59956 bp Feature: gene Location: 260045-260557 bp Feature: domain Description: PRK02304 Location: 260048-260552 bp Feature: domain Description: PRK02 304 Location: 2 60048-2 60552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recJ (TIGR00644), RVT-GII, HNHc (smart00507), ssDNA-exonuc_C (pfam10141), PRK02304 (adenine phosphoribosyltransferase; Provisional)

Seq: MIFC01000043.1 Bacillus cereus strain MOD1_Bc112 Bc112_contig_43, whole genome shotgun sequence (61332 bp)
Overview 1 RT 1: 46497-56032 bp Neighborhood of RT #1 [46497, 56032] DEXDc RVT_N RVT-GII GIIM HNH RVT-GII HNHc Feature: gene Location: 46497-46688 bp Feature: gene Location: 46748-49309 bp Feature: domain Description: DEXDc Location: 47501-48455 bp Feature: domain Description: DEXDc Location: 47501-48455 bp Feature: gene Location: 49881-51692 bp Feature: RT Description: RVT_N Location: 49935-50181 bp Feature: RT Description: RVT_N Location: 4993 5-50181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50235-50889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5023 5-50889 bp Feature: domain Description: GIIM Note: maturase Location: 50952-51186 bp Feature: domain Description: GIIM Note: maturase Location: 50952-51186 bp Feature: domain Description: HNH Note: nucleases Location: 51426-51561 bp Feature: domain Description: HNH Note: nucleases Location: 51426-51561 bp Feature: gene Location: 52544-54442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52868-53606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52868-53 606 bp Feature: domain Description: HNHc Note: nucleases Location: 54185-54332 bp Feature: domain Description: HNHc Note: nucleases Location: 54185-543 3 2 bp Feature: gene Location: 54775-55317 bp Feature: gene Location: 55334-56032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXDc (smart00487), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), HNHc (smart00507)

Seq: MIFC01000056.1 Bacillus cereus strain MOD1_Bc112 Bc112_contig_56, whole genome shotgun sequence (2681 bp)
Overview 1 RT 1: 165-2450 bp Neighborhood of RT #1 [165, 2566] RVT-GII HNHc Feature: gene Location: 165-341 bp Feature: gene Location: 734-2566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034-1739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034 -1739 bp Feature: domain Description: HNHc Note: nucleases Location: 2318-2450 bp Feature: domain Description: HNHc Note: nucleases Location: 2318-24 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: MIFC01000065.1 Bacillus cereus strain MOD1_Bc112 Bc112_contig_65, whole genome shotgun sequence (2375 bp)
Overview 1 RT 1: 613-1906 bp Neighborhood of RT #1 [613, 2259] RVT_N RVT-GII GIIM Feature: gene Location: 613-2259 bp Feature: RT Description: RVT_N Location: 655-892 bp Feature: RT Description: RVT_N Location: 65 5 -892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 946-1606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 946-1606 bp Feature: domain Description: GIIM Note: maturase Location: 1675-1906 bp Feature: domain Description: GIIM Note: maturase Location: 1675 -1906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MIFC01000072.1 Bacillus cereus strain MOD1_Bc112 Bc112_contig_72, whole genome shotgun sequence (2319 bp)
Overview 1 RT 1: 436-1713 bp Neighborhood of RT #1 [436, 2318] RVT-GII RVT_1 Feature: gene Location: 436-576 bp Feature: gene Location: 927-2318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-156 3 bp Feature: RT Description: RVT_1 Location: 1599-1713 bp Feature: RT Description: RVT_1 Location: 1599-1713 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_1 (pfam00078)