myRT

myRT report for GCA_001903615.4_ASM190361v4

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Seq: MPYH04000044.1 Klebsiella pneumoniae strain CRK0164 CRK0164_NODE_10_length_185481_cov_74.7132_ID_19, whole genome shotgun sequence (185481 bp)
Overview 1 RT 1: 112671-118428 bp Neighborhood of RT #1 [112671, 118433] RVT-Retrons Q P Feature: gene Location: 112671-113348 bp Feature: gene Location: 113758-114423 bp Feature: gene Location: 114677-115606 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 114776-115361 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 4776-1 1 5361 bp Feature: gene Location: 115642-116667 bp Feature: domain Description: Q Location: 115645-116659 bp Feature: domain Description: Q Location: 1 1 5645-1 1 6659 bp Feature: gene Location: 116667-118433 bp Feature: domain Description: P Location: 116691-118428 bp Feature: domain Description: P Location: 1 1 6691 -1 1 8428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Q (PHA02536), P (PHA02535)

Seq: MPYH04000011.1 Klebsiella pneumoniae strain CRK0164 CRK0164_NODE_23_length_75401_cov_72.7259_ID_45, whole genome shotgun sequence (75401 bp)
Overview 1 RT 1: 50191-54298 bp Neighborhood of RT #1 [50191, 54300] DinI RVT-GII PRK10276 umuC Feature: gene Location: 50191-50433 bp Feature: domain Description: DinI Location: 50242-50422 bp Feature: domain Description: DinI Location: 502 42 -5042 2 bp Feature: gene Location: 50799-51050 bp Feature: gene Location: 51050-52534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51452-52142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51452 -52 142 bp Feature: gene Location: 52613-53032 bp Feature: domain Description: PRK10276 Location: 52616-53027 bp Feature: domain Description: PRK102 76 Location: 52 616-5302 7 bp Feature: gene Location: 53035-54300 bp Feature: domain Description: umuC Location: 53038-54298 bp Feature: domain Description: umuC Location: 53038-542 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: MPYH04000073.1 Klebsiella pneumoniae strain CRK0164 CRK0164_NODE_33_length_23175_cov_25.7167_ID_65, whole genome shotgun sequence (23175 bp)
Overview 1 RT 1: 1017-4121 bp Neighborhood of RT #1 [1017, 4135] DUF1472 RVT-GII PRK10276 Feature: gene Location: 1017-1109 bp Feature: domain Description: DUF1472 Location: 1029-1095 bp Feature: domain Description: DUF1472 Location: 1029-1095 bp Feature: gene Location: 1333-1563 bp Feature: gene Location: 1797-3305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2199-2913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2199-2913 bp Feature: gene Location: 3305-3556 bp Feature: gene Location: 3710-4135 bp Feature: domain Description: PRK10276 Location: 3713-4121 bp Feature: domain Description: PRK10276 Location: 3 713 -4121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1472 (pfam07339), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)