myRT

myRT report for GCA_001903695.4_ASM190369v4

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Seq: MPXU04000002.1 Klebsiella pneumoniae strain CRK0177 CRK0177_NODE_17.ctg_1, whole genome shotgun sequence (99799 bp)
Overview 1 RT 1: 1112-4216 bp Neighborhood of RT #1 [1112, 4230] DUF1472 RVT-GII PRK10276 Feature: gene Location: 1112-1204 bp Feature: domain Description: DUF1472 Location: 1124-1190 bp Feature: domain Description: DUF1 472 Location: 1 1 24-1 1 90 bp Feature: gene Location: 1428-1658 bp Feature: gene Location: 1892-3400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2294-3008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2294-3008 bp Feature: gene Location: 3400-3651 bp Feature: gene Location: 3805-4230 bp Feature: domain Description: PRK10276 Location: 3808-4216 bp Feature: domain Description: PRK1 0276 Location: 3808-421 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1472 (pfam07339), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: MPXU04000022.1 Klebsiella pneumoniae strain CRK0177 CRK0177_NODE_22.ctg_1, whole genome shotgun sequence (75401 bp)
Overview 1 RT 1: 50191-54298 bp Neighborhood of RT #1 [50191, 54300] DinI RVT-GII PRK10276 umuC Feature: gene Location: 50191-50433 bp Feature: domain Description: DinI Location: 50242-50422 bp Feature: domain Description: DinI Location: 502 42 -5042 2 bp Feature: gene Location: 50799-51050 bp Feature: gene Location: 51050-52534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51452-52142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51452 -52 142 bp Feature: gene Location: 52613-53032 bp Feature: domain Description: PRK10276 Location: 52616-53027 bp Feature: domain Description: PRK102 76 Location: 52 616-5302 7 bp Feature: gene Location: 53035-54300 bp Feature: domain Description: umuC Location: 53038-54298 bp Feature: domain Description: umuC Location: 53038-542 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: MPXU04000051.1 Klebsiella pneumoniae strain CRK0177 CRK0177_NODE_8.ctg_1, whole genome shotgun sequence (275804 bp)
Overview 1 RT 1: 112671-118428 bp Neighborhood of RT #1 [112671, 118433] RVT-Retrons Q P Feature: gene Location: 112671-113348 bp Feature: gene Location: 113758-114423 bp Feature: gene Location: 114677-115606 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 114776-115361 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 114776-1153 61 bp Feature: gene Location: 115642-116667 bp Feature: domain Description: Q Location: 115645-116659 bp Feature: domain Description: Q Location: 115645-116659 bp Feature: gene Location: 116667-118433 bp Feature: domain Description: P Location: 116691-118428 bp Feature: domain Description: P Location: 116691-118428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Q (PHA02536), P (PHA02535)