myRT

myRT report for GCA_001905795.1_ASM190579v1

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Seq: LIXJ01000041.1 Streptomyces sp. CB01580 scaffold41, whole genome shotgun sequence (54298 bp)
Overview 1 RT 1: 38887-41620 bp Neighborhood of RT #1 [38887, 41679] Laminin_G_3 RVT-GII Feature: gene Location: 38887-41160 bp Ori: OKJ25174.1 Feature: domain Description: Laminin_G_3 Location: 39151-39661 bp Feature: domain Description: Laminin_G_3 Location: 391 51 -39661 bp Feature: gene Location: 41209-41679 bp Ori: OKJ25175.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41488-41620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 488-41 620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII

Seq: LIXJ01000011.1 Streptomyces sp. CB01580 scaffold11, whole genome shotgun sequence (240852 bp)
Overview 1 RT 1: 15599-26046 bp Neighborhood of RT #1 [15599, 26046] DUF3995 Acetyltransf_3 RVT_N RVT-GII GIIM HNH P-type_ATPase Feature: gene Location: 15599-16039 bp Ori: OKJ35094.1 Feature: domain Description: DUF3995 Location: 15644-15995 bp Feature: domain Description: DUF3995 Location: 15644-15995 bp Feature: gene Location: 16578-17126 bp Ori: OKJ34954.1 Feature: domain Description: Acetyltransf_3 Location: 16632-17052 bp Feature: domain Description: Acetyltransf_3 Location: 16632 -17052 bp Feature: gene Location: 17518-19269 bp Ori: OKJ34955.1 Feature: domain Description: RVT_N Location: 17584-17821 bp Feature: domain Description: RVT_N Location: 17584-1782 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17881-18538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17881-18538 bp Feature: domain Description: GIIM Note: maturase Location: 18589-18823 bp Feature: domain Description: GIIM Note: maturase Location: 18589-1882 3 bp Feature: domain Description: HNH Note: nucleases Location: 19147-19249 bp Feature: domain Description: HNH Note: nucleases Location: 19147-192 49 bp Feature: gene Location: 20076-24713 bp Ori: OKJ34956.1 Feature: domain Description: P-type_ATPase Location: 22290-24240 bp Feature: domain Description: P-type_ATPase Location: 2 2 2 90-2 42 40 bp Feature: gene Location: 25777-26046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3995 (pfam13160), Acetyltransf_3 (pfam13302), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), P-type_ATPase (cd07539)

Seq: LIXJ01000002.1 Streptomyces sp. CB01580 scaffold2, whole genome shotgun sequence (571852 bp)
Overview 1 RT 1: 457563-467856 bp Neighborhood of RT #1 [457563, 467856] DUF4158 DDE_Tnp_Tn3 COG4584 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 457563-460583 bp Ori: OKJ43844.1 Feature: domain Description: DUF4158 Location: 457581-458064 bp Feature: domain Description: DUF4158 Location: 457581-458064 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 459321-460482 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 4593 21-460482 bp Feature: gene Location: 460842-462488 bp Ori: OKJ43845.1 Feature: domain Description: COG4584 Location: 460860-461712 bp Feature: domain Description: COG4584 Location: 460860-461712 bp Feature: gene Location: 463239-464930 bp Ori: OKJ43962.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463404-464199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463 404-464199 bp Feature: domain Description: Intron_maturas2 Location: 464301-464529 bp Feature: domain Description: Intron_maturas2 Location: 4643 01-464529 bp Feature: domain Description: HNHc Note: nucleases Location: 464703-464886 bp Feature: domain Description: HNHc Note: nucleases Location: 464703 -464886 bp Feature: gene Location: 465815-466114 bp Feature: gene Location: 466408-467856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4158 (pfam13700), DDE_Tnp_Tn3 (pfam01526), COG4584 (Transposase ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)