myRT

myRT report for GCA_001905965.1_ASM190596v1

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Seq: LPTO01000191.1 Shigella boydii strain 600746 600746_193, whole genome shotgun sequence (6581 bp)
Overview 1 RT 1: 1-2701 bp Neighborhood of RT #1 [1, 2715] DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 1-246 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4-220 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4-220 bp Feature: gene Location: 808-1941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 910-1564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 0-1 564 bp Feature: domain Description: GIIM Note: maturase Location: 1642-1864 bp Feature: domain Description: GIIM Note: maturase Location: 1 642-1 864 bp Feature: gene Location: 2057-2203 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2069-2180 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2069-21 80 bp Feature: gene Location: 2230-2715 bp Feature: domain Description: COG3547 Location: 2248-2701 bp Feature: domain Description: COG3547 Location: 2248-2701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: LPTO01000218.1 Shigella boydii strain 600746 600746_220, whole genome shotgun sequence (3940 bp)
Overview 1 RT 1: 100-1877 bp Neighborhood of RT #1 [100, 1877] RVT-GII GIIM Feature: gene Location: 100-903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-895 bp Feature: gene Location: 956-1282 bp Feature: domain Description: GIIM Note: maturase Location: 989-1208 bp Feature: domain Description: GIIM Note: maturase Location: 989-12 08 bp Feature: gene Location: 1635-1877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)